Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_33569 |
Symbol | |
ID | 7203921 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | + |
Start bp | 1267677 |
End bp | 1270254 |
Gene Length | 2578 bp |
Protein Length | 694 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186215 |
Protein GI | 219113263 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0582245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCCG TATGTAACGC GAATACGGTG AATTTGCGCA ATAAGGCCGA CACAAACTCC ACACGTGACA CGTAAACGCC GCGCCCATCG GATTGGCTCA CACTTGCGTT TTCCATACTA AGTGGCATAC ATCCGAGGGA CACGTCGCAA GGTAGTGTAC CGTGACAAAT ATGGGTAAAA ACATCGTTTG AGAACATGCT TTCGATTTTG ACGCCCAAGT TGTCTTGGCA AAAGTCGTTA AACATTACAC GGAATCCACA GCTGCGAAAA TCAGCTCCGG CACTACTCTC TCATACTTGA CTTCTACAAA AGACAGCAGC TCCTGGACCG GCACTGCGGA AGCTTTTATC TTGCATTGGA AAAACCATCT ACGCATCTAC AATGCTACCG TGCCAACTAC GGAACAGGTG CCACCGCAAC TCTGCCTCTT TTTACTCGAG TCTTCTGTTC GCGACGTCTC CGAACTACGT CAAGTCAACA CTACAGCGAA TTTAGATTTA GCTAAAGGGG GGTCTCCCAT TGACTATGAA AATTATCTAA GTCTACTTCC CGCTGCAGCA ACTTTATACA ACAAGGGGAA CAACCTTTCC AACTCTTCTA GCCCTAAAAC CAAGCGTAGT GCCTTTGTTG CCGAAAGCAT CTTCCCCAAC AATAACTACG GCATTGATTA TGACATTGAT TTATCTCTGT CCATTCTGTA CAAAGCAAAT GTGATAAATT ATAGCCACAC AATGCTACAA TTTGATACTA CGTTGTAGAT AGAATTGCTT AGCCTTGTGT GGCTATAATT TATCAAATGC TCACAACCGT CGAGCTGGAG ATCAAAATCA AGACCGCCAG GGCAATGTCA ACCGTGAACA ACCGTATATC CTCCGTGAGA TGTGGGATAA ACTGTCCAAT GATGCAAAGG CAATTCTCCG AGGCATGTCC TCTCCCGCGG AAGGTCATGC CTTGTCTACA GCAAGTCAAC ATCCGCATTT CATGCCAACT CTCATTCTCT AGCCGACATG GGACACCCCT CCCCAACCGA CGACTTGTTG AATGAAAGCA ACAACAACAA ATTCCACAAT TGTGGAAACA ATACGGAACT ACTTGCCCAC CTTACTGATT GTTCTAGCCC TATGGCAAAC GGTGACATTT GCAAAGTTCT TGCCTCTGCC TCTTCCCACA AGAAAAACGC AAACAACTCC ATCCAGTCAA ACATGCTTGA GTACACCATT TCACGGCACT CCATTGTGGG AACCACATCT TCTCTCATTG ACAGAGGTGC CAATGGCGGA CTTGCTGGAA TTGATGTTAA GGTTATCAAC AAAACAGGCC ATTCGGCAAG CATCACTGGT ATCAACGACC ACACTCTGCC TGATTTGGAC ATTGTCACCG CTGCTGGCCT TGTTGAATCC CAGAACGGAC CTATTATTGT CTTATTACAT CAATATGCCC ATCACGGAAA AGGAAAACTA TCCATTGTGG TGCGCAACTA GAGTACTACA AGAACACTGT TGAAGATTGA TCTCGTGTAC TTGGAGGTAA ACAACGCATT GTAACACTAG ATGACTATGT TATTCCTCTA CAAATCCGTC AGGGACTTGC ATACATGGAC ATGCGTCCAA ATTCCGACGC AGAGTTTGAT ACAATTCCCC ACATTGTACT TACTTCCAAT GTCAATTGGG ACCCGTCCAT CATTGACAAT GAAATTGACC TTGCCACGGA TTGGTATGAT ACCATCCAGG ATCTCCCGAA CGACCCATAT GTTGAACCTT GTTTCAATTC AACCGGGGAC TACCGGCATA GACATGTTGC GAATTTTTAC ATATTTTCGT CACCTGCAAT GATTGACCGT TCCACCGCTA TTGACAGTAT ACTCTCGTCA AATAGGCACA ACATGGTTCA AAATGAACGC AATTAGGAAG CCTTGCGCCC TTGTCTTGGT TGGGTCTCTA CCGACACAGT CAAGAAAACT ATCTTGGCCA CTACGCAATT TGCTCGAGAG GTATATAATG CACCCATGCA TAAACATTTC AAGTCTCGCT TCCCATCGCT TAATGTTCAT CAACGCAACG AAGCTGTGGC TACCGATACC ATCTGGTTGG ATACGCCTGC CATTGATAAT GGAGCAAAAT TTGCGCAATT ATTCGTTGGA TGCCGATCGC TTGTTACCGA TATTTATCCC ATGAAAACAG ACAAGGAATT TGTTAACGCT CTCGAAGACA ATTTTTGTCA TCGAGGCGCC ATGGATAAAC TTATCAGCGA CCGCGCCAAG GCCGAAATCA GCAAGAAAGT TTCCGACATT ACTCGTGCCT ATAACATTGA TCAATGGCAA AGTGAGCCCA ACCACCAGCA CCAGAATTAT GCTGAACATT GGATTGCAAC TGTGGAAGCA AATGCAAATA ACATTCTAAA CAAAACAGGC GCACCCAATT CTACATGGCT ATTGTGTGTT TCCTACATTT GTTATTTATT CAATCATGTG GCACATGAGT CCTTGCACGA CCGCACCCCA ATCGAAATTC TTTCCGGTAG TACCCCTGAC AATAGCGTAC TCCTTCAATT TCATTTCTGG GAACCAATCT ATTATTGA
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Protein sequence | MTSVCNANTV NLRNKADTNS TPAKISSGTT LSYLTSTKDS SSWTGTAEAF ILHWKNHLRI YNATVPTTEQ VPPQLCLFLL ESSVRDVSEL RQVNTTANLD LAKGGSPIDY ENYLSLLPAA ATLYNKGNNL SNSSSPKTKR SAFVAESIFP NNNYGIDYDI DLSLSILYKA NNCLALCGYN LSNAHNRRAG DQNQDRQGNV NREQPYILRE MWDKLSNDAK AILRGMSSPA EGHALSTATD MGHPSPTDDL LNESNNNKFH NCGNNTELLA HLTDCSSPMA NGDICKVLAS ASSHKKNANN SIQSNMLEYT ISRHSIVGTT SSLIDRGANG GLAGIDVKVI NKTGHSASIT GINDHTLPDL DIVTAAGLVE SQNGPIIVLL HQYAHHGKGK LSIVGLAYMD MRPNSDAEFD TIPHIVLTSN VNWDPSIIDN EIDLATDWYD TIQDLPNDPY VEPCFNSTGD YRHRHVANFY IFSSPAMIDR STAIDIKKTI LATTQFAREV YNAPMHKHFK SRFPSLNVHQ RNEAVATDTI WLDTPAIDNG AKFAQLFVGC RSLVTDIYPM KTDKEFVNAL EDNFCHRGAM DKLISDRAKA EISKKVSDIT RAYNIDQWQS EPNHQHQNYA EHWIATVEAN ANNILNKTGA PNSTWLLCVS YICYLFNHVA HESLHDRTPI EILSGSTPDN SVLLQFHFWE PIYY
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