Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_33555 |
Symbol | |
ID | 7204102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 1227930 |
End bp | 1228454 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186491 |
Protein GI | 219113815 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000939258 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCAGC GCTTTCGGAA ACACGCAAAG GGGGGTGTTC AGTCCAAGAA CAACGAAGTC GAAGGGCATG TTGTGAGTAA GGACAAACAG CCAATCGAGC TCGGAATCCT TTCGTACGCC AACCTTACAC CTGATGGGAA GCATGGGGAT TTTGCTTCAG CGTTGAAGCA AAGCCAAACG TCTGGCAAAC CGATCTTTGC CAATTTCGTG GAATGGCCGG GCTGTGCCGG TGTAGTGGAT GCGGGAAAGT ACATCTTTGC TGAACCCAGC ATTGCACGCT TGATTCAAAC ACACTTTGTG CCGGTCGCGT TCAATACGTG GGATCGAAAC GATTGTGGCT ACAACCAGGC CATGAAGGCA TGGGGAGGAC CTTTGGCCCG TTCGGATTGG GGGTACGTTC GGATTATTGC TACAGATGGC AGGACGATTC TGGCATCCAC CCCAGCTGTT ACCGGGCGTA ACTCCAAGCC ACAAGTTCAG GCAGCGATTC GGGAAGCTTT ACAGAAATTT GCCGAGCACG ACTGA
|
Protein sequence | MMQRFRKHAK GGVQSKNNEV EGHVVSKDKQ PIELGILSYA NLTPDGKHGD FASALKQSQT SGKPIFANFV EWPGCAGVVD AGKYIFAEPS IARLIQTHFV PVAFNTWDRN DCGYNQAMKA WGGPLARSDW GYVRIIATDG RTILASTPAV TGRNSKPQVQ AAIREALQKF AEHD
|
| |