Gene PHATR_33555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_33555 
Symbol 
ID7204102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1227930 
End bp1228454 
Gene Length525 bp 
Protein Length174 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186491 
Protein GI219113815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000939258 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAGC GCTTTCGGAA ACACGCAAAG GGGGGTGTTC AGTCCAAGAA CAACGAAGTC 
GAAGGGCATG TTGTGAGTAA GGACAAACAG CCAATCGAGC TCGGAATCCT TTCGTACGCC
AACCTTACAC CTGATGGGAA GCATGGGGAT TTTGCTTCAG CGTTGAAGCA AAGCCAAACG
TCTGGCAAAC CGATCTTTGC CAATTTCGTG GAATGGCCGG GCTGTGCCGG TGTAGTGGAT
GCGGGAAAGT ACATCTTTGC TGAACCCAGC ATTGCACGCT TGATTCAAAC ACACTTTGTG
CCGGTCGCGT TCAATACGTG GGATCGAAAC GATTGTGGCT ACAACCAGGC CATGAAGGCA
TGGGGAGGAC CTTTGGCCCG TTCGGATTGG GGGTACGTTC GGATTATTGC TACAGATGGC
AGGACGATTC TGGCATCCAC CCCAGCTGTT ACCGGGCGTA ACTCCAAGCC ACAAGTTCAG
GCAGCGATTC GGGAAGCTTT ACAGAAATTT GCCGAGCACG ACTGA
 
Protein sequence
MMQRFRKHAK GGVQSKNNEV EGHVVSKDKQ PIELGILSYA NLTPDGKHGD FASALKQSQT 
SGKPIFANFV EWPGCAGVVD AGKYIFAEPS IARLIQTHFV PVAFNTWDRN DCGYNQAMKA
WGGPLARSDW GYVRIIATDG RTILASTPAV TGRNSKPQVQ AAIREALQKF AEHD