Gene PHATR_33543 details

Gene Information

• Locus tag: PHATR_33543
• ID: 7203912
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 1195742
• End bp: 1196521
• Gene Length: 780 bp
• Protein Length: 259 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002186200
• Protein GI: 219113233

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTTTT CATATTCACA AAAGTTCTCC ATCGCCCTCG TGCTTTGCTT AATCGTGACA 
GTAAAGAGTT TTAGAGTCTC CGTTTCTAGT GGCCGTCTCG CTAGCGCGAC CAAGATTTGC 
GTCTCCGAAT CCTCGACGGA TAATGTCGAC ATTTCCTCCG CATTCAAGGG TCTCGACCTG 
TCTCTCGTCA AACCTTTGGG AATGATTCTA GAAGAAGTCG AAGAAGGAGC TGCCAAGGGA 
GTCTTTGTTA AAGAAGTAGC CGAGGAAGGC TCGTCGGTCC CCTACGCTGA CGAAATTGTA 
GGTTTAAAGT TAATCACCGT TGCCGGAGAA GACGTCACGT CTCTGACATT CGATGAGGTC 
ATGGACAAGA TCATCAATTC TCCCGAAACT GTGGATTTGC GACTCGTATC GATGAATGAA 
ATAGATAGCG TTGATGCGGA AGAGGACAGT GCACCGGCTT TTGAAATCGG AACGTCGGTA 
ACCATCAAAC TGCTACAGGA AGGCAAGGAT GATCTCGACA TTGAGACCAA AGTTGGTGAC 
AATCTGCGAC AAGTCCTTCT GGACAATAGC GTAGAAGTCT ACCAAGGTAT GAAGCAAAAA 
CTCGGTAACT GCGGGGGTGG TGGACAGTGC ACCTTTTGTG CCTTTGATTT CGTTGACAGC 
GAAGGTTGGG CAGAACGGTC GGACTACGAA AGCCAGAAAC TGAAAAAAAA TCCCGACGCC 
CGTCTCACTT GTCTCAACAA TATTCAAGGC CCGGTAACGA TTCGAAAAGC AAAGCGATAA 

 

Protein sequence

MSFSYSQKFS IALVLCLIVT VKSFRVSVSS GRLASATKIC VSESSTDNVD ISSAFKGLDL 
SLVKPLGMIL EEVEEGAAKG VFVKEVAEEG SSVPYADEIV GLKLITVAGE DVTSLTFDEV 
MDKIINSPET VDLRLVSMNE IDSVDAEEDS APAFEIGTSV TIKLLQEGKD DLDIETKVGD 
NLRQVLLDNS VEVYQGMKQK LGNCGGGGQC TFCAFDFVDS EGWAERSDYE SQKLKKNPDA 
RLTCLNNIQG PVTIRKAKR