Gene PHATR_33462 details

Gene Information

• Locus tag: PHATR_33462
• ID: 7204037
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 989114
• End bp: 991168
• Gene Length: 2055 bp
• Protein Length: 684 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002186442
• Protein GI: 219113717

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATGCTC GATATCGACA AGATGCTCGG TCCAACACAA TTCTCTTTGA ATCGACAAAA 
TGCACGGAGG TAAATTCCTC GCAGCTTCTG CCGCCCTCAA AGTTGACTTT AAATCAAGCT 
GTTGAAGAAG CCGAAGTTTT GCGCCAGCGT GCGAGAGGTC TGCTGGAGGA GGTCGAGACC 
ATGGAAGCCG CGTTGAAAGA GTCTCGATCG CGGAAAGCCA ATAAAAAAAT ATCAGAAAAG 
ATGCATATGG TTGATAAGCT CTTCTTGAAT CGGCCGCTGA CACCGGAAGC GGTGGCGCGC 
GTTATGCGAG AAGAACGCTG GTCAGCCGAT CAGGCCTGTC TCGTTTTGGA TGCCTTGTAC 
GATCGGTTGA CGCAAGGATC TAGCACTTTA TCACCTGCCG AACTAAAAAT CGGCGATCAT 
CAAACAAGGG AAGGAGCCAA CCACACCGAG GTGTTGATTT TGGAATCTTA CATTGATTGC 
TTGATTCGTG GCGCGGAGAA TTTAGATCAA GCATGGAGCA GTCCCTCCGA AAGCCGCCAT 
CCTCGATGGT CTGGTCGGGT AGCGTCCACG CTAAAATCAC AACTCAACGA ACGTTATCGC 
AGAGATGCAG AAAATTTTCA ATTGCGAGTA GCAGCTGGGG CTAACGACGC TGTTCTAAAC 
GCAAACGAAA CCGTACAGGA GTATATGCGG CGAACACTTG GCTTACCGTC TTTAACGGAG 
GAAATGTTGG GAAAGTCTAG AAACCTCACA CATGTCATGA ATCGTATTTC GCTGATACCA 
GTGTGGATAC CATCGTCTTT GCTACAATTC GTGACTCGTA CCAGAGCCAG AATCAGCCCC 
GCGGACGTTA AAGCTATCAA GAATGAAGTG TTAGTGGAGA GCCGCTTCTT TTGTACGTCG 
TTTGATTCCA TACCAAGCGC TGCGATCTTT CGAGGTAATT TAAGACCGCC TGTAGGGCAT 
ACTGAAACAC GGAATTTGCC TGCCGAGTGC TTCAGAGCGA TTCAGCAAAA AATGGATGAA 
CGAGGTCTGT CGGAAAGAGT TCAGCTCTTC CTCATGCCAG ATCCAGAGTG GCGACCAACC 
AGAGACGTGA GAGATTCGAA ACCTAAACCG GTAATTTTAG CTATCCCACA AGACATTGGC 
CCATCGAGAC CGGAAAGTGT GGACTGGAGA CGATTCGCAC TCAAATGCTT TGCTGTTGGA 
CTGAGCGCAT TAACGACTTA TACATACTCT GTCAGCTGTT TTGCACTGAA TCCATTTTTC 
TTCGAGTCAA TTGTCAGTCG AAATGACGTG TCAGTGCTAA GAGTCTGCCT CCCAGTGTTT 
GTCGGGGTTG TGGCTGTACA ACTTGTTCAC GAATTAGCGC ATTACTTTGT TGCGAAACAG 
CGTGATATCA AGATAGGATT ACCCACTACC GTTCCTTCGA CGCAACTGGG TACGTTCGGC 
TGCGTAACCC CTTTAAAATC CTTTCCTACA ACCCGCGAAG CCCTTCTCGA TTTTTCCCTG 
AGCGGACCTG TCGCTGCAAT TTTGATGTCA ATCATCATGA TGAGCCTTGG TATCTCCGCA 
ACCCTCAATG CGTCCGCAGC CACTATCTCA ACCTTTCCAA CGGTTCCTCT CACTATGTTA 
AAATCCAGTC TTCTAACCGG AATACTATTG AGCGTGCTAG CACCAAAAGT TATGATGATG 
CCCCTGCCTC AACCTATTCC GCTACATCCC ATTTTCTTCG CTGGGTTTGT CGGACTCATT 
TCTTCTGCCC TGAACTTGTT ACCAATAGTT CGCATTGATG GCGGACGCGC CTGTACAGCG 
GCACTGGGGG GCCGTGTGGG CGCCTTCGCC TCCATTGGAA CCGCCATGTT TTTGTTGTCG 
TTCCTGGCTT CTGGAAGTTC TGGTTTGGGC CTAGCATTCG GATTGTTTGT GGGAATCTTT 
CAGCGCCGAC CTGAAGTCCC CGTGCGAGAT GAAGTAACCG AAGTCGGTAG GTTCCGACTC 
GGGGCATGGG TAGTTTCCGT GGGAATTGCC GCTTTTTCCT TAATGCCATT TCCAGGATGC 
TCCGGAATTC TTTAG 

 

Protein sequence

MHARYRQDAR SNTILFESTK CTEVNSSQLL PPSKLTLNQA VEEAEVLRQR ARGLLEEVET 
MEAALKESRS RKANKKISEK MHMVDKLFLN RPLTPEAVAR VMREERWSAD QACLVLDALY 
DRLTQGSSTL SPAELKIGDH QTREGANHTE VLILESYIDC LIRGAENLDQ AWSSPSESRH 
PRWSGRVAST LKSQLNERYR RDAENFQLRV AAGANDAVLN ANETVQEYMR RTLGLPSLTE 
EMLGKSRNLT HVMNRISLIP VWIPSSLLQF VTRTRARISP ADVKAIKNEV LVESRFFCTS 
FDSIPSAAIF RGNLRPPVGH TETRNLPAEC FRAIQQKMDE RGLSERVQLF LMPDPEWRPT 
RDVRDSKPKP VILAIPQDIG PSRPESVDWR RFALKCFAVG LSALTTYTYS VSCFALNPFF 
FESIVSRNDV SVLRVCLPVF VGVVAVQLVH ELAHYFVAKQ RDIKIGLPTT VPSTQLGTFG 
CVTPLKSFPT TREALLDFSL SGPVAAILMS IIMMSLGISA TLNASAATIS TFPTVPLTML 
KSSLLTGILL SVLAPKVMMM PLPQPIPLHP IFFAGFVGLI SSALNLLPIV RIDGGRACTA 
ALGGRVGAFA SIGTAMFLLS FLASGSSGLG LAFGLFVGIF QRRPEVPVRD EVTEVGRFRL 
GAWVVSVGIA AFSLMPFPGC SGIL