Gene PHATR_33400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_33400 
Symbol 
ID7204002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp791663 
End bp792064 
Gene Length402 bp 
Protein Length133 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186417 
Protein GI219113667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000544709 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAATC TTGCACCGGT TTCAGACTTT GACCCCAAAG AGTTGCCGGA AGGCTTTACA 
GCGGCCGGGA ACAATAGTGG CGCGTCACAA GAAAAGCAAC AGCAACAAGC ACAGAAGCAA
GCTATTTTGG AACAAGCGCT AACGCCGGAA GCGCTGGCAA GACTAGGCCG CATTAAACTC
GTCAAAGCCC AAAAGGTGGC TCAGCTCGAG AATACTATAG TCAGCATGGC CATGTCGGGG
AAACTTCCCG GCCAGATCAG TGAAGGAAAA TTGATCGAAA TGCTGGAACG GGGCAGTGCA
AAAGCAGCGA GTATAAATGC TTCAAGTGGT GCCATTAAAA TTCAACGAAA AAAATACGCG
TTCGATTCAG ATGACGACGA CGATGACGAA GATCTCATGT AG
 
Protein sequence
MDNLAPVSDF DPKELPEGFT AAGNNSGASQ EKQQQQAQKQ AILEQALTPE ALARLGRIKL 
VKAQKVAQLE NTIVSMAMSG KLPGQISEGK LIEMLERGSA KAASINASSG AIKIQRKKYA
FDSDDDDDDE DLM