| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_33371 |
|---|
| Symbol | |
|---|
| ID | 7204217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | + |
|---|
| Start bp | 719170 |
|---|
| End bp | 720190 |
|---|
| Gene Length | 1021 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186116 |
|---|
| Protein GI | 219113065 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACA AAGTGTGCCC GGCAATGATT CTTCCTCAAG TATCAAAATT CGCTTGGAAT
GGTAGCATCC TAATATTGTT GCCTCTGGCT GCGTTGGCTC AGGTCAAAGT GTTTCTGCTG
GCAGGACAGT CAAATATGGT CGGTATGGCA TCAGTACAGC ATTTAGAGAT ACTGATAAAC
GATCATAACA TTACCCATAA CGATTTTCGG GAAGATCTTT GGAACGGGAC TGGCTTTCGA
TCGCGTGACG ATGTTTTTGT TAAATACAAT GATCGCGTCG GGAAATTGGA GCCCGGATAC
GGAGCCTCTG TGAGCAAGTT TGGTCCTGAA TTGGGATTTG GGTGGACAGT CGGGGACGCC
TTCACAGATA ATCCTGTCAT CCTTATCAAG ACAGCTTGGG GGGGGAAGAA ATCTTGCTGT
TGATTTTCGG CCCCCACTGT CGGGTGAAGG TCAATTCCCT GACGTCAAAC CATCAAAGTA
TGGATGGGAA TACCGACAGA TGATTCATGC TATTTTGGAT GGGCTTGAGG CTATCCAGGA
AATTTATCCA GACTACTGTG AAGACCAAGG CTACCAACTT TGCGGTTTTG TGTGGTTTCA
GGGATGGAAT GACATGCTTT CATGGCCTTT TGTTAGAGAA TATGGCTTCA ACCTTGCGAA
TCTTATCCGG GACATACGCC GAGAAACGGA CGAGCCGTCC CTTCCTTTCG TTGTCGGGGA
ATTAGGTATG CATGGAAACT TGACTGGCGA TCACAGCACA GCAGCAACGC GCGTCAAAAC
GATTCGGGCC ATGGAGCAAG GCGTCACTTT GCTGAGCGAA TTTCAAAATA ACACTATCTT
TGTGAAAACG TCACCGTACG TTATCAACAA CGGAACCAAA TACAACAAAA TATATCACTA
TAATGGACGC GCTGACACTT ACTATCACAT GGGAAAAGCT TTTGGAAGGG GGCTTTTGCA
GATTCTAAAC AATTCGGCTG CCACGCGACA AAGAGTTCGC AAAGCACGAC CAAAAAACTG
A
|
|---|
| Protein sequence | MIDKVCPAMI LPQVSKFAWN GSILILLPLA ALAQVKVFLL AGQSNMVGMA SVQHLEILIN
DHNITHNDFR EDLWNGTGFR SRDDVFVKYN DRVGKLEPGY GASVSKFGPE LGFGWTVGDA
FTDNPLGGGR NLAVDFRPPL SGEGQFPDVK PSKYGWEYRQ MIHAILDGLE AIQEIYPDYC
EDQGYQLCGF VWFQGWNDML SWPFVREYGF NLANLIRDIR RETDEPSLPF VVGELGMHGN
LTGDHSTAAT RVKTIRAMEQ GVTLLSEFQN NTIFVKTSPY VINNGTKYNK IYHYNGRADT
YYHMGKAFGR GLLQILNNSA ATRQRVRKAR PKN
|
|---|
| |