| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_33153 |
|---|
| Symbol | |
|---|
| ID | 7204272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | + |
|---|
| Start bp | 196183 |
|---|
| End bp | 197613 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186012 |
|---|
| Protein GI | 219112857 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCG GGACAAAAAA CAGCTTCTTC GCCACCACAG TCTGCGTTGC CTTGTTTTGC
TTTGTAAGAG CCCTTACCTC TTTGGGTACT GTCCAGAATC TCCAAGTCTT CGATACCGAA
CTCAAAGACA TAGCAGAAAG CGTTCATTCA CTTTCGGTCC ACGGGACCGG TGCTGACAGC
AACAACTCAT TGCCAAAGGC AAAACCTGAT GATGTCTACG TATTAGAATC AAAGACCAAG
GCTGCAGTCC GTGAAAGTAG CCTCAGGGAA AGCACTCTGG TCACCAATGC CGGTATCGAA
TTTCGGAAAC CAATATGGAG TAACGCTTCC AGCTTTGACA ATGGCGCACC GAGCATTCTT
GTCCAACTCA ACGGAGAATT GGCAAACTAT CTCGGATTTA TTGCCAAGGC TTTTGGACTG
GTGTGGTGGC TGGAGCGGGA GTATGGTGTG AATCCTACAA TTGTGCTGAG ACATCAACAG
CATCCCAAAT GGGTTGGTGC TCACGCGGAT GTTACTCGAT GTTTTCCGTA CTTGAGAGAC
TTTAATTTTG GGGCCGGAAA TACTCGGGAT ATAAGCAAAG AACTGAGTGT TCTGAGTCAA
TCTCATCAAC AAAGCAATGG TACGGCTGAA AGAGTTGTTG ATATCAGGAG CGAAGTGCCA
TACGACAAAA CAATCCAGTC CTTTTTGAGT CTCTACGCGA AGAGCCACAT CCACATTGGG
GGAGAAAAGA GCCGTATCAA CATACCTTTT CTGACCACTA AGCAAATGAG TTGCAGAGAC
CTCATAGTGG ACAAGTACTA TGACGATATT CGAAGAATAT ACCGATTTGA CAAAAGCTGC
TGCGTTGATG TACCCGACCC GGATGAATCT GTCTTTGTAG GTAGCTATTG CCAATCAGAT
ATGTGCAGAT TTTGGCGTTT CCGTCACTGA CTTTTCTTTG TTTTGCTGTG CTAGCATTTT
CGCAACTTTG TAAAGGAAAG GTCTGGACTA CGAAAGCAAC CTGGATATGA AGAGCTTGCT
CCGGAGCAAG TGGCGAACGA GCTGTTTGCG CATCTGAATC CGGGCGACAA AGTAGCAATA
ATCTCTCGCT ACCCCAATGA CTTCCGAACC CAAATGATTG TGGGCGCATT TGAGAAGCGG
AAGATTCGGG CTCGAGTTGT AGAGCCACGG TCCGGGGTGG CAGACTTTTG CTTTTTGATG
CATACGCAAA AGGAGATGGT TGGCACGGCT TGGTCTACTT ATTTTCTTTG GGCTGGCCTG
CTCGGAAATG CTACAAGCGT ACGACCGTAT ACAGCCATTG TACCTGGTCG GAACAGCAAA
ATCGACTCTC ACAATTTTAC GCATCCAGAC CTCAAATCCC GTTTTCGTTT TGAGCACTAT
ATCAGCAACT TTACTGCTGG GGATCTACGT AAACCAAAAG GTGAACAATA G
|
|---|
| Protein sequence | MSTGTKNSFF ATTVCVALFC FVRALTSLGT VQNLQVFDTE LKDIAESVHS LSVHGTGADS
NNSLPKAKPD DVYVLESKTK AAVRESSLRE STLVTNAGIE FRKPIWSNAS SFDNGAPSIL
VQLNGELANY LGFIAKAFGL VWWLEREYGV NPTIVLRHQQ HPKWVGAHAD VTRCFPYLRD
FNFGAGNTRD ISKELSVLSQ SHQQSNGTAE RVVDIRSEVP YDKTIQSFLS LYAKSHIHIG
GEKSRINIPF LTTKQMSCRD LIVDKYYDDI RRIYRFDKSC CVDVPDPDES VFERSGLRKQ
PGYEELAPEQ VANELFAHLN PGDKVAIISR YPNDFRTQMI VGAFEKRKIR ARVVEPRSGV
ADFCFLMHTQ KEMVGTAWST YFLWAGLLGN ATSVRPYTAI VPGRNSKIDS HNFTHPDLKS
RFRFEHYISN FTAGDLRKPK GEQ
|
|---|
| |