Gene PHATR_33124 details

Gene Information

• Locus tag: PHATR_33124
• ID: 7204255
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 108080
• End bp: 111525
• Gene Length: 3446 bp
• Protein Length: 1108 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002186280
• Protein GI: 219113393

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0372289
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCCTC TCGAACATGT CCTTGTGAAC CTCTTGGGAG CAACAACGTT GGATTCGTCG 
TACCGTCGGT TCTTTGAAGA GTATGGGATT ACTCAGGCCA GTGAATTGGC CTCAATCACT 
GAACATTGTC TTGCAATGGT GTCTTATGGC GTCTTGACCC CTGCTGTGGG AGACGGCCCT 
GCTTCAATTG TTCGTACATT CCTTCCGCCT GCGCAACAGG ATCGGATTTT GAAGATTGTA 
CAATGGTTCC TTTTGAAAGG CACCAATGTG ACAAACAACA CCTGGCTTGA ACTTACCTCT 
GATGTTCTTG AGTATTGGCA ACCAGCCTCT GCTATTGTTG CCCCCGCTAC TCCTGTTGGA 
TCTGATGCTC GGAGTTCCTT TGCCGAAAGT GCTGCTGCAA AATTTCGAAA GACGATCAAG 
AACCATTCCG TCCCGTACCC AAAGTTCAGT GAGGACCGTT TTTGGGTTAC TTGGAATACG 
AATATTCGTA TTAAACTCCG TATCCACGGT GTTCAGTTTG TACTTGACCC GGACTACTTG 
CCCCAGACCG TTGATGAGAT GGACACGTTC GTTGAGATGC AGAATTTTGT CTTCGGTGTA 
TTCAACGACA TTTTGTTGAC CCCTCGTGCG CGTGGGATCC TCCACAAGCA TGTGGATGAG 
CTGGATGCTC AGTCGGTCTA CCGCGACCTT GTTGCCTCGT ACGGTAAAGG TATTAACGCG 
CAGATCACGG CTACATCCAT TGAAACGAAG CTCACCTTGT ATTCGTTTGC GACTTCAAAG 
AGCAAAACTT GCGTTACTTT TTTGACAACT TGGCGCAATT TGATCTACGA TCTTGAACGG 
ATCAACAAGT TCCCTTTGCC AGATCACCAA AAGAGCGTGC GACTGAAGTC AGCTGTCCGT 
TCCCATCCTC AATTGAAACT TTTCCTTGGC AATGTGCAGC TTTACTCTTG TACCCATGTG 
GGAAAGAGTT CCGACGACTC AGACTTCGAG TACGTCTATG ATCTGATGCT CGAGCATGCA 
ACCAATATTG ATCAGACCGA TTTTGAAGAC CGCGGTAATA ACCGTGGTGG CCGTTCTGCA 
AACAACGCGA AGTCCCAGTC TTCTTCAAAG AAGAAAACTA ACAAGCCGCT TGGTAAGAAG 
CACAAGAATT ATGTGCCTCC TGAGAAATGG AATGCTCTCT CTCCTGAAGA GAAGCGCACC 
ATTATGGACC AACGAGGACC TTGTCCTGCT GCAGCTCCAG CCTCTGCTCT GTCCGTGAAT 
GCCGCTGCTA CTCAGCCTCC TCCCACCGTG TACGTGAGCG ACTCGACGGC TGTGGATAAC 
CAAAGTCTTG CTTCGACTCA AGTTCCAAAT GCTGCTGCAT CCGGACACCT GCTACGGTCG 
CTAATTTCAA ATTCTGCCGC TCGCCAGCCG TCCAACGGCG CAACCTCTGA TTCTTTTTCG 
GTGAATGGTA CCACGTACCG CCGTGAGGTA AACCATGCCT CCGTCAGATA CCGTCTGTCT 
ACTCACGATG TTTCTTTGAC TAAAGATTCT TTGATTGATG GTGGTGCCAA TGGTGGCCTT 
AGCGGCTCGG ATGTGACCGT TATTTCCCAA TCTCTGTCGC AAGCTACTGT TTCTGGGATT 
GGAAACTCGG AGCTCACCAA CCTTCGTCTG TCGACGGTTG CCGGACTCAT CCACACCACG 
GATGGTCCTA TCATTGGAGT GTTTAATCAG TATGCTCATC TTGGTACTGG TAATACCATT 
CATTTGTGCA ACCAAATGCG CTCCTGGGGA GTCACAGTTG ACGACGTCCC TCGTACTTTT 
GGTGGCAAAT AGAGTATTGT CACGTCCGAT GGCCGTTTTG TCATCCCGCT TTCAGTTTCT 
GGCGGACTCA CCTATTTGTC TATGCAGGCC CCCACCGAGG AGGACCTGGA CAATTTCGAG 
TGGGTTCATT TTACCGCCGA CAACGAGTGG GACCCGAATG GCGTGTCTTC TCTCCTGCTG 
CGACCGATGA TGATCTCAGT TTGCAGCTTT CTGCCGACCA TGTTCCGGGA TGAACGCTTC 
AACAACTTTG GCCTTCTTGC GCACTCCACG GTTGTCAGTC GTTCCCCCTT GAACGCCGAT 
GTCTTGCAAC CCAATTTTGG ATGGGTCCCC AGCGCTCGAA TCTCCCGCAC GTTCGAAAAT 
ACCACACAAT TTGCTCGTGC CGATGCTCGT TTGCCTTTGC GCAAGCATTT CAAGTCGCGC 
TTCCCTGCTG CCAATGTTTC TCGTTTGAAC GAAATTGTGG CAACCAATAC TTTTTTCTCG 
GATACCCCTG CGGCCGATGA CGGCATTTTC AACCATGGGG GGGGGGGGGG GGTACAATGG 
CCCAACTTTT CGTAGGAAAA AGTTCGCAAA TCACCTCTGT CTTCCCAATG AAGCGCAAAT 
CTCAGTTTGC CCATGCTTTC GAGGACTTTA TTTGTACCCA TGGTGCTCCC AATGCACTCC 
TCAGCGACAA TGCTCGTGCT CAGATCGGTA AGCAGGCGCT TCAGATTTTG CGAATGTACG 
CAATTGACGA TATGCAGTGC GAGCCGCATC ACCAACACCA GAACTACGCG GAACGCCGCA 
TTCAGGAAGT GAAAAAGATG GTAAATACCA TCATGGATTG TACAAACACT CCTCCGGAGT 
ATTGGTTGCT TTGCTTATTT TATGTGACCT ACTTGCTGAA TTGCCTTGCA GTTGAGAGCT 
TGAATTGGCG TACCCCGTTG CAAGTTGCGT ACGGCCAGCG TCCTGATATT TCCGCTTTGC 
TCCTTTTTCG TTGGTTTGAG CCGGTCTACT ACTACGACCC TGACCATGCA TCTTTCCCGT 
CGCAATCTCG CGAGAAGACT GGTCGTTGGA TTGGTGTTGC CGAACATAAA GGTGATGCTT 
TGACTTATTG GATTTTGACC GATAATACTC ACCAAGCCGT TGCCCGTTCT GTTGTTTGTT 
CAGCCAACGT TGATAACGGT CTGAAAAACC ACCGTGCTGC GAATTCCTCT CCCGATGGTG 
GGGAGCCTTC GAATCCTAAG CCTATTGTGT TGGCTTTGAG TGATCTACGC AATCCTGCTG 
CGATCAACCC ATCGCTCTTT GAATCCCCTG CGTTTTCTCC TGACGAATTA ATTGGTTGAT 
ACTTGGTTCG TGAAGCCCCT GATGGCCAGA GCCACCGAGC CCTTGTTGCT CGTAAAATTG 
TTGATGCCGA TTCCGACAAT CGCCAAGCAA TCCGTTTCCT ATTGCAAATT GATGAGAAGG 
ATGCCGACGA GATCATTTTG TATAATGAAC TCTGTGACTT GATGGAAGCT CAGCAAACCG 
ACCGTGTCAC GAATGGAAAT GTTGAAGGCC ACTTCAAATT TACTGGTGTC ATTGGACATC 
AAGGACCGTT GCAACCGACT GATGTAAACT ATAAGGGATC GTCGTGGAAT GATTTGGTTC 
AATGGGAAGA TGGTTCCCAG ACCTAG 

 

Protein sequence

MDPLEHVLVN LLGATTLDSS YRRFFEEYGI TQASELASIT EHCLAMVSYG VLTPAVGDGP 
ASIVRTFLPP AQQDRILKIV QWFLLKGTNV TNNTWLELTS DVLEYWQPAS AIVAPATPVG 
SDARSSFAES AAAKFRKTIK NHSVPYPKFS EDRFWVTWNT NIRIKLRIHG VQFVLDPDYL 
PQTVDEMDTF VEMQNFVFGV FNDILLTPRA RGILHKHVDE LDAQSVYRDL VASYGKGINA 
QITATSIETK LTLYSFATSK SKTCVTFLTT WRNLIYDLER INKFPLPDHQ KSVRLKSAVR 
SHPQLKLFLG NVQLYSCTHV GKSSDDSDFE YVYDLMLEHA TNIDQTDFED RGNNRGGRSA 
NNAKSQSSSK KKTNKPLGKK HKNYVPPEKW NALSPEEKRT IMDQRGPCPA AAPASALSVN 
AAATQPPPTV YVSDSTAVDN QSLASTQVPN AAASGHLLRS LISNSAARQP SNGATSDSFS 
VNGTTYRREV NHASVRYRLS THDVSLTKDS LIDGGANGGL SGSDVTVISQ SLSQATVSGI 
GNSELTNLRL STVAGLIHTT DGPIIGVFNQ YAHLGTGNTI HLCNQMRSWG VTSIVTSDGR 
FVIPLSVSGG LTYLSMQAPT EEDLDNFEWV HFTADNEWDP NGVSSLLLRP MMISVCSFLP 
TMFRDERFNN FGLLAHSTVV SRSPLNADVL QPNFGWVPSA RISRTFENTT QFARADARLP 
LRKHFKSRFP AANVSRLNEI VATNTFFSDT PAADDGIFNH GGGGGRKSQF AHAFEDFICT 
HGAPNALLSD NARAQIGKQA LQILRMYAID DMQCEPHHQH QNYAERRIQE VKKMVNTIMD 
CTNTPPEYWL LCLFYVTYLL NCLAVESLNW RTPLQVAYGQ RPDISALLLF RWFEPVYYYD 
PDHASFPSQS REKTGRWIGV AEHKGDALTY WILTDNTHQA VARSVVCSAN VDNGLKNHRA 
ANSSPDGGEP SNPKPIVLAL SDLRNPAAIN PSLFESPAFS PDELIAPDGQ SHRALVARKI 
VDADSDNRQA IRFLLQIDEK DADEIILYNE LCDLMEAQQT DRVTNGNVEG HFKFTGVIGH 
QGPLQPTDVN YKGSSWNDLV QWEDGSQT