| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_33107 |
|---|
| Symbol | |
|---|
| ID | 7204246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | - |
|---|
| Start bp | 61686 |
|---|
| End bp | 63209 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186271 |
|---|
| Protein GI | 219113375 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACG GGTGTCTTTT CCTCGTCGCT TCCAGCCTCT TTGCCAGCAA CAGTAATATC
ATTGCGTATG CTAGCTCGGT AAGAGGTGCC CTAGCTTCAA GCGAAAGCGA AATGACAGGA
TCTTCCAATT CTCGTCGTCC TTTCGCAGCC AACGACGTTC TGACCTGCCG CGTCACTGTT
GTTGGCACAA TGTTGGACAT TAACGACGAT CGTTCCCAGG CCAACCAAGA TGAGCAGATA
TCTTGTATTC CCATTGTTGA TGAAAAAGAA CTTGACAACG TCTTTCCCCT GGATCTCCCT
GCCAAAGTAC TTGCGGTACA CATGTCCTCC ATTGAACGTG CTAGCTTGTA TGTTGCCGTC
AAGGGTGCCT ATGTTACCGA AGACCAGCTT GTCGTCTCGG ACAAAGCTGC GTATGAAGTC
TTCAATGAGC TACCGGGACA CCTACGACGC CTCGAAGAAC AACGCCGCGA CCTCTTCACC
ACTGGTACCA AAACGTTGGG GGTCGTTCGA ATATCCACCA CCGATGCCCA ACCCATGTTC
AGCGCTGCCC AGCTCGAAGA TGGCATTTTC GGCAACGGAC TTAAAAATGA TGGTGTCACT
GTTGTGTCGC AGTATGAAGA ATGCTCCTTT GGGAAGCTTA AGTGGGGTAA AACCAGAGAA
GGGGTCGTTG ACATCAAGGT CAACCAGTCC ATCAAAAGCT TCAAATCTGC ATCTGATCTG
GTCACTGCCG TCCAGAAGCA GATCAAGGCC GAACGAGGCA TTTCCACAGT GGCGAGTCTC
GGTGACAAGG TACTGATGTG CTTGCCGCCT GGTACAGGAA GCTGGGCCGC TAGTGCCGGT
GTAGGTCACT GGCGTGCGCA ATTCAACAAC GAGTGGTGCC TGAGTTTAAC GGGCTTAGTA
CACGAGCTTG GTCACACGAT GAGTCTTGGC CATTCCGCGG AGGACGGCAT CGAATACGGA
GACGTGAGTG GAATGATGGG CTACGGGCGT AGGAATGCGA ATGGGCCTCG CAAATGTTTC
AATGGATACA ACAACTTCAG GCTCGGCTGG TACTCCGACC GCACGATGAA AGTCGACCCC
AGTACTAGTC CTCGGGTGTA TAAGCTGGCT ACTTTCGTGG ACTACGATAA GACCAACAGC
AAGGAACCGG TCTTAATCAA CGTCGGTGAC GAATATTTTC TTCAGTACAA TCGAGCCAAA
GCTTTCAACT CTGGCACGGA AGAGAAACAG AACCTACTCA CCGTCACTAC TGACACCGCA
AACACATCAG GATCTACGAA TTTAGGGGGC TTCCGATCCG GTGAAACATT TAATAAGGTT
TCCAACTATC AATCGTCACG CAAACGACTT GTAGTGAAGG TCTGCGACCA AATCAGCGGC
AACGGCAGCT CACCCGACGC ACTGATGGTC AGTATTGGCT TGGATGGTTC CGCCTGTGGC
CAAGTACAGC AACCTGATGA CAAGCCTTCC TTTAGTATCG ACAAGGCGAT CATTTTGACG
GCGGCCAAGA CAACGAAAAT TTAA
|
|---|
| Protein sequence | MKHGCLFLVA SSLFASNSNI IAYASSVRGA LASSESEMTG SSNSRRPFAA NDVLTCRVTV
VGTMLDINDD RSQANQDEQI SCIPIVDEKE LDNVFPLDLP AKVLAVHMSS IERASLYVAV
KGAYVTEDQL VVSDKAAYEV FNELPGHLRR LEEQRRDLFT TGTKTLGVVR ISTTDAQPMF
SAAQLEDGIF GNGLKNDGVT VVSQYEECSF GKLKWGKTRE GVVDIKVNQS IKSFKSASDL
VTAVQKQIKA ERGISTVASL GDKVLMCLPP GTGSWAASAG VGHWRAQFNN EWCLSLTGLV
HELGHTMSLG HSAEDGIEYG DVSGMMGYGR RNANGPRKCF NGYNNFRLGW YSDRTMKVDP
STSPRVYKLA TFVDYDKTNS KEPVLINVGD EYFLQYNRAK AFNSGTEEKQ NLLTVTTDTA
NTSGSTNLGG FRSGETFNKV SNYQSSRKRL VVKVCDQISG NGSSPDALMV SIGLDGSACG
QVQQPDDKPS FSIDKAIILT AAKTTKI
|
|---|
| |