Gene PHATR_3140 details

Gene Information

• Locus tag: PHATR_3140
• ID: 7204266
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 171438
• End bp: 172025
• Gene Length: 588 bp
• Protein Length: 196 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002186010
• Protein GI: 219112853

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACCGACCGGG ACGACGGTCT CTTTACCACC GTCGTCTGTA CTCGCAACAA TGAAGCACTG 
GGGCTTGTCT ACTCCTCCAC GTCGTCTATT GTCGCCGCAT TGGAATGTGG TCGGGGTGTC 
TACTACAGCC GTTCCCGGAA CGGATTGTGG CGCAAGGGCG ACACGTCCGG ACACTTTCAG 
GTACTGCACC GGCTCGACAA AGACTGTGAC GGGGATGCTT TGCGGGTGAC GGTCACTCAA 
AAAGGCACCC CTGCCGCATT TTGCCACTTG AATACTCTAA CGTGCTGGGG TACGTCGAGA 
GGCTTGCGAC ATTTGGAAGA AACGCTGCAA GACCGACTCG TGTCGGCTCC GGAAGGATCC 
TACACGAAAC GTCTGTTTCA AGACGAGACA CTGTTGCGGG ACAAGCTGGT CGAAGAAGCG 
CAGGAATTGT CGGAAGCCGA TACGAAGGCA CACGTGGCGG AAGAACTGGC GGATGTCCTC 
TACTTTGCCA TGGTGAGGGC GGTCAAGGCT GGAGTCAGTT TGGATGATGC CGTCGCAGAG 
CTAGATTCTA GGGCGCGAAA AGTGACGCGA CGAAAAGGCG ATAGTAAA 

 

Protein sequence

TDRDDGLFTT VVCTRNNEAL GLVYSSTSSI VAALECGRGV YYSRSRNGLW RKGDTSGHFQ 
VLHRLDKDCD GDALRVTVTQ KGTPAAFCHL NTLTCWGTSR GLRHLEETLQ DRLVSAPEGS 
YTKRLFQDET LLRDKLVEEA QELSEADTKA HVAEELADVL YFAMVRAVKA GVSLDDAVAE 
LDSRARKVTR RKGDSK