| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_25867 |
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| Symbol | myoC1 |
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| ID | 7204087 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | - |
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| Start bp | 1155138 |
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| End bp | 1157848 |
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| Gene Length | 2711 bp |
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| Protein Length | 804 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186480 |
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| Protein GI | 219113793 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GACATGGCCG AACTCCAATT CTTGCACGAG GCGGCCGTCC TTTACCAAAT CAAAGCTCGA
CACGCCTCAC AGAGGCCCTA TACTCGGGTG GGCGATATCG TTGTGGCCGT TAATCCCTAT
ACATGGATCG AAGGTCTCTA CGATCCTGCG CAACAAGCAC TGTACGCCAA CCGACTAGTT
TGGGACGACC ATGATAATCA AGGTAAGCGA GTTTTCCTGG CCGGAAAAAC CCGTTGTGTC
TGTGCTCGTA TAGTGACCGG GCTCTGTGTT CTTACCCGTA ACCTCCATAC GATTGTCTGG
CAGACACTTC GACAATACCC CGTGAAGAAA AAAAGGACGA CGGAATGCAC AGAGGTTCCT
CGGCGTCCTC ATCCGCCTTT GTCAGTGCCT ACGATCGACT CGGATTCGAG CCTCACGTAT
ACGAAATCTC TGCCTTGGCC TATCGTGGCA TGATTCAGGA AGGTAAGAAT CAGACCATTA
TCGTTTCGGG AGAATCCGGC GCGGGCAAGA CGGAAACGGT CAAAATTGTC GTCCAGCACC
TCGCAATGTT GGAGCACACG GCACCGTCCG TTTCAGTAGA CACCAATCCC GCATCGCTGG
ATATCGTTCG TCACGTCGTG GAAAGCTCCC CCTTGTTTGA AGCCTTTGGT AACGCCATGA
CGACGAAAAA TTCCAACGGC TCCCGCTTTG GGAAAGTGAC ACGGTTGCAC TTTGCCCCGG
ACTGGACAGC CGATACCCAA GACACGTTCT GCTACAATCT CAAGGGAAGC TCCTACCAGA
CGTATCTCCT CGAAACGAAT CGAATTGTCT ACCAAACTGC TGGCGAACGA AGTTTTCACA
TATTTTATCA GCTTCTTAGT GCTTCCAGTG ATCTCAAACG AACCATGCTC GGTGAAGAGT
GGATTGATGC CACAGAAAAA GATTTCTGCT ACCTGGGTGA GCCAAGAGAG TGCCAAGTCG
ACGGACATTC AGATGCGCAG TCATTCATCA AGACCTTACA CGCCTTAGAG CTCTTCGGTT
GGGAAGGCGA TGCTCTTCAA AGTTTATTTG GAGCCTTGGG AGCTGTCCTT CGCATAGGTA
ATCTAACCTT TCAGGAGCAA GAGGAAGGAG AAGCAATCGT CTCTTCCGAT ACGGCGTTGC
GGCTGTTGGC CGACGCTGTC GGTCTTTCAA CCACGGATCT GGAATCAGCT TTCACCCATC
TCATTATCAA AGCCAATAAC GACACTATCG AAGTTCCTCT TAGTGCCGAG ATCTCCAAGA
ATACTACTGA TGCCTTGGCC AAACAAATGT ACTCTTTTAT TTTTGATTCG GTCGTCATGA
AAGTAAATCA ATGGACTGCT TCATCGAAAT CCTCGGAAGC TGAGGCCGCT ATTTCGCTAG
TCGACATTTG CGGGTTTGAA TCATTCGAGA CCAATCGATT CGACCAACTC TGTATCAACT
ATGCCAACGA AAAACTGCAG CACAAGTATG TGCAGGATAA TCTCTTGAAA AAGCGGGTTG
AACACGAGAG AGAGGAAATC GAGCTCTTTG ACACGACACT GATGGATAAC TCGGATATTT
TGGACCTGAT TGAGGGTCGA GAAGGTCTCA TTAACGTCAT GAACGAAGAA TGCATGAGGC
CCAATGGCAA TAACAAGGTA CTTCAAACCT TGTCATAGGT TCAGGCTGTG ACGCATAGAT
TTTGTTTTCT CACATGGCTT TACTGTTTAT CTCTACAGAC ATTCGTTTTC AAATTGACTA
ACGTCCATCG AAAGAATGCA CGGTTTCTCA GAAAGAAATT GGACCGTTCC ACGCAGTTCG
GTATATCACA CTTTGCTGGA GACGTCATGT ACGACGCATC CGAGTTTATT GAACGAAATA
CCGACAAGGT ACCGGAATCT CTCCTAACGC TTTTCACAAA GAGTAGCAAT GTCTTGATAC
GAGAACAGTT TGTCGCCTTT CTCCAGAAAA GCGAAGAGAA GCGGTCTACT CGAGCAACCA
GGAAAAAGTC TACCGTCACA ACAGTCTTGG ACAAATTTCG AGTGAGCCTG AAAGACTTGA
TGTTAACAAT GTCTGATACA CACACTCGCT ACATCAGATG CATCAAGCCG AACGACACCA
TGTCCATAGC GATCGCCGAT CATCTTCTTA CAGTGAAACA ACTTCAATGT GCTGGGCTTG
TGACCGCAAT AGACCTCACA CGGGAATCGT TTCCAAACAA GTACTCATTT TCGACGGCGG
TTCAGCGATT TCATAGCCTC ATGAACAGTG AACAAAAGCA CGATTTGAAA GACATGAAGC
TCCACGACAA GGCGCAGTAC ATGATGTCGA GTTTGTTCAC ACCTTTGATT GAACAATATC
GTAATAGCGA TTTCACGATG CCTTTTGTGT GCGGCAAGAC AAAGATATTC TTTAGATCCG
GAGCCCTCGA GGTCCTCGAA ACACAACGCA GAGAATTGCA TTTTATGAAA GCATCTATTT
TGCAGCAACA GATCCGGGGA ATCCAGTCGA GATCAAATTA TAGAAGGATG AAATTCGCGG
TTATTTCAAG CCAGGCCGCG TATCGTGGCA AAACCAAAAG AAGTGAATTT CGACGAGCTC
AACAATCGAT TATCCTCCTT CAAGCTTGGG CCCGGCGATC GAGAACACAG AGAAAATACC
TTCGTTTAAA ACGTGCTGTT GTTGTGTTGC AAATGCGCGC TCGCAGAATA TATCATGCTC
ACCTTCGTTT G
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| Protein sequence | MAELQFLHEA AVLYQIKARH ASQRPYTRVG DIVVAVNPYT WIEGLYDPAQ QALYANRLTL
RQYPPHVYEI SALAYRGMIQ EGKNQTIIVS GESGAGKTET VKIVVQHLAM LEHTAPSVSV
DTNPASLDIV RHVVESSPLF EAFGNAMTTK NSNGSRFGKV TRLHFAPDWT ADTQDTFCYN
LKGSSYQTYL LETNRIVYQT AGERSFHIFY QLLSASSDLK RTMLGEEWID ATEKDFCYLG
EPRECQVDGH SDAQSFIKTL HALELFGWEG DALQSLFGAL GAVLRIGNLT FQEQEEGEAI
VSSDTALRLL ADAVGLSTTD LESAFTHLII KANNDTIEVP LSAEISKNTT DALAKQMYSF
IFDSVVMKVN QWTASSKSSE AEAAISLVDI CGFESFETNR FDQLCINYAN EKLQHKYVQD
NLLKKRVEHE REEIELFDTT LMDNSDILDL IEGREGLINV MNEECMRPNG NNKTFVFKLT
NVHRKNARFL RKKLDRSTQF GISHFAGDVM YDASEFIERN TDKVPESLLT LFTKSSNVLI
REQFVAFLQK SEEKRSTRAT RKKSTVTTVL DKFRVSLKDL MLTMSDTHTR YIRCIKPNDT
MSIAIADHLL TVKQLQCAGL VTAIDLTRES FPNKYSFSTA VQRFHSLMNS EQKHDLKDMK
LHDKAQYMMS SLFTPLIEQY RNSDFTMPFV CGKTKIFFRS GALEVLETQR RELHFMKASI
LQQQIRGIQS RSNYRRMKFA VISSQAAYRG KTKRSEFRRA QQSIILLQAW ARRSRTQRKY
LRLKRAVVVL QMRARRIYHA HLRL
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