Gene PHATR_18808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_18808 
Symbol 
ID7204129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1343896 
End bp1344535 
Gene Length640 bp 
Protein Length205 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186511 
Protein GI219113855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.808582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TACTTCCAAA TTCTCCCTTT CCATGTCGTC TTCCAAAAAA GCCTTAGTTG TTGATCCCTT 
TTGTTTCCGT CAGTTCGATG AACACGCCGA TAGCAAAAAG TACGGTGGGA CGGTCTTTAG
TCTGTCGGTT GCCGACTTTG AACGCATTGT CAACGAGAGG TTCCAATCGG CCGACTTGAA
GGACGGCTAC GCACCCTTTT GCAAACACGT ATTCTTGGTC AATGATTTTA CCAACGCTCG
GGTAAACGTG TTGCCCATCA CAGAAGAGAA CGAACACCTG ATTCGTACCA AGTACGAAGC
CCGCAACGAT AAGGAGCTGC CCGTCTTGGC TCGATTCTTC CCACAAAACC TTGTTGGGGA
CGATTTGCCT GTAGCGAAAT ACCTCGACTT GATTCTCTAT TCACGGGAAC AAATAAACAA
AGAAAATGCT TCCCAAGGTC GGGATCCAAA TCCAGCATCG GCACCGTGGA ATATTGTCTC
CATCAAGGCG CAAGATGTAC CGGATGAGCT ACCCATGAAT CCGATTACCG CCATGCGCAA
TTCTCTGGGG AAGGCCGAGG GCGGTAGCGG AGTACCGTTG GATCGAAAGG CCTACGCGGA
AGCCGTCAAC TATTGGAAGG ACCATGCTGT GATTTCGTAA
 
Protein sequence
MSSSKKALVV DPFCFRQFDE HADSKKYGGT VFSLSVADFE RIVNERFQSA DLKDGYAPFC 
KHVFLVNDFT NARVNVLPIT EENEHLIRTK YEARNDKELP VLARFFPQNL VGDDLPVAKY
LDLILYSREQ INKENASQGR DPNPASAPWN IVSIKAQDVP DELPMNPITA MRNSLGKAEG
GSGVPLDRKA YAEAVNYWKD HAVIS