Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_18793 |
Symbol | |
ID | 7204126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 1331148 |
End bp | 1333723 |
Gene Length | 2576 bp |
Protein Length | 750 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186508 |
Protein GI | 219113849 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCGATTGAC TGTGACCGAG ATCATCCCTC TGTCGAGTCG GTATCGAAAC GCAACGTAGG GTCCGTATCG TATCGTAACG AATCCTATCA TTATCTATTG ATTTAACACA CCGCCACTCT CCCAGCACCC GTCTTCCTAC ACCCGTCGAC TCTTACCATG ACGACGCCAC TTTCGTCACG ACTGCTGGCC GCTTTGCGTG CATCCCGACC CGCATCGCGC CGATCGGCGC TACGGAGCAC ACAAATCGGG GCGTGTATGT TGCCAAGAAA CAGCCCACAC CGTGGGTTTC GTACATCCAC TCAAGCGATG GCAGAAGGTA TTAGCCAAAG TACCGAACGT CCCGCTGCCA CTTCCACTGC CGACGTCAAA GACAAGCCTC CCGCTCCCGA CGTTCGAGTC CAAGCATCGG AACCCGAGAA ACAGCCGGAA ATGCTAGAGT TTCAGGCCGA GACTCGCCAG CTTCTGGATA TCGTGACTAA TTCGCTGTAC ACGGACAAGG AGGTCTTTCT GCGCGAACTG GTGTCTAACG CCAGTGATTC TTTGGAAAAG CTGCGGCACC TGCAGGCCAC CAACGCGATG ATCGTAGACC CGGACTTGGC CTTGGAGATC CGCATCGAAC TCGACGAAGT CACCAGTACA ATTTCCATTA CGGATACGGG TATTGGTATG ACTCGGGACG ATATGATTCA GAATCTGGGA ACGATTGCCC GCTCCGGATC CAAGCAGTTT GTCAAGGAGC TAGAACGTCA GGCATCGGGC TCCATCCCCG ACCCGGCACG CGGAATCATT GGAAAGTTTG GTGTCGGCTT TTACAGTTCC TTCATGGTTG GCGAAAAAGT AGAAGTGCGT TCACGCTCCG CACAGCACGA CGACGAACCA AGCCGTGTTT GGACTTCTGA AGGACAAGGC GCCTACTCCA TTACCGACCT GCCGGAAGAT GTACGGCAGC AACGAGGTTC CTCGGTCGTG ATACATTTGA AAGAAAAGCA CTGGGATTTC GTGGACGAGT CACGCATTGA GGGAATTCTC AAGCGCTATT CCAACTTTGT CAACTTTCCC ATTTACTTGA ACGGCAATCG TGTCAATACA CTCGAGGCGA TTTGGACCAA AGAACCCAAG GAAGTGGAAG AGGAAGCGTA TTCGGCCTTC TACAAGTATA TTGCTAACGC CATTGATGAG CCTCTTGATG TTTATCACTT TCGGGCGGAT GCGCCCTTGG ATGTGAAAGC GCTCTTCTTT ATTCCCTCGT TTCATTCCGA AAAGTTCGGT ATGGAACGAA TGGAGCCCGG TGTTTCGCTC TACAGTCGCA AGGTACTGAT TGAATCCAAA TCGAAGGATA TACTTCCCGA GTGGCTACGC TTTATCAAGG GTATTGTCGA CTCGGAAGAC CTGCCTTTGG CTATTTCGCG TGAAAAGCCC CAAGATTCTG CGCTGATTGC CAAGCTACGC AAAACCTTGA CGCGCAAATT CATTGCCCAT TTGACCAAAA TGGCAAAGAA AGATCGCCCC AAGTTTCTCG ACGAATTCTA CCGAGAATAC TCTTTCTTTC TGAAAGAGGG GATTTGTCAA GAATACGAAT TCCAAGAACA CCTCGCTAAA CTGCTGTTTT TCGAAACGTC TCGTAGTACC GACGCTGATA TGGTGTCGTT CGACGAATAC GTTGGACGAA TGCGTCCCGA ACAAAAAGAG ATCTACTATT TAATGGCCCC CTCGCGTGAA GCTGCAATAA ACAGTCCCTA CCTAGAAACT TTCGAAAAGG CCGGAGTCGA GGTTCTCTTT TTGTTTTCCA CGATTGACGA TTTTGTCATG GCCAATTTGG AACTTTACGA AGGTCGCAAG CTCGTTTCCG TCGAAAAAAG TGATATCGAT TTGAAAGATT TGATGGATGC CGACGCTGAC AAGGCGGACG AGGGAGAAGA AATCTTCACG GCGGATAAAG AATTGTCGGC GACAGAGCAA GTCGAGTTCT GCAATTGGTT CAAAACCGAG CTTGGGAGCA AAAAAATTTC TTCCTGTACG GTGACAGCGC GTTTGTCGTC ATCTCCAGCC ATTGTCACGG ACAGCGAGTC CGGCGCCATG CGGAGGATGA TGCGACTGGT GGATACCAGC GAAGGCAGTC GTGATTCTGT GCCACTTCCC AAGCAACACG TGGAAATCAA TCCAAAACAC CCGGTGATTG TTGGTATTCA CGACCTTATT ACCAAGGAAC CAACACTGGC ACGTGTACTA GCCGAACAAG TTTACGACAA TTGCCTCGTC GCGGCGGGCC TCTTGGATGA TAGTCGGTCG ATGCTTCCGC GTTTGAACGA TATCTTGGTG TGCGTTGTCA ACGGAGCGAA AGCGAAGCAT GGATCGGGTT CAAAAGAAAT AGTAGAGCCA GAAGTGGTGG CGAAGACTGA CAATGAGTAA ATTCAAGAAG TGTTTGGCGA GCCTGTTACT TGCTAAAAAT TTCCGTCGCG GAATGAATTG AAAAGCTGGG GCAGCCAGGC CAGCGAACGG CAGAAGCATC CCGACAGCAA ACCAGACCTG GTGCCACCAC CGAGTTACAA AATATTTAGA TATAAATTAC AGCAGG
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Protein sequence | MTTPLSSRLL AALRASRPAS RRSALRSTQI GACMLPRNSP HRGFRTSTQA MAEGISQSTE RPAATSTADV KDKPPAPDVR VQASEPEKQP EMLEFQAETR QLLDIVTNSL YTDKEVFLRE LVSNASDSLE KLRHLQATNA MIVDPDLALE IRIELDEVTS TISITDTGIG MTRDDMIQNL GTIARSGSKQ FVKELERQAS GSIPDPARGI IGKFGVGFYS SFMVGEKVEV RSRSAQHDDE PSRVWTSEGQ GAYSITDLPE DVRQQRGSSV VIHLKEKHWD FVDESRIEGI LKRYSNFVNF PIYLNGNRVN TLEAIWTKEP KEVEEEAYSA FYKYIANAID EPLDVYHFRA DAPLDVKALF FIPSFHSEKF GMERMEPGVS LYSRKVLIES KSKDILPEWL RFIKGIVDSE DLPLAISREK PQDSALIAKL RKTLTRKFIA HLTKMAKKDR PKFLDEFYRE YSFFLKEGIC QEYEFQEHLA KLLFFETSRS TDADMVSFDE YVGRMRPEQK EIYYLMAPSR EAAINSPYLE TFEKAGVEVL FLFSTIDDFV MANLELYEGR KLVSVEKSDI DLKDLMDADA DKADEGEEIF TADKELSATE QVEFCNWFKT ELGSKKISSC TVTARLSSSP AIVTDSESGA MRRMMRLVDT SEGSRDSVPL PKQHVEINPK HPVIVGIHDL ITKEPTLARV LAEQVYDNCL VAAGLLDDSR SMLPRLNDIL VCVVNGAKAK HGSGSKEIVE PEVVAKTDNE
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