| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_18745 |
|---|
| Symbol | UGDH1 |
|---|
| ID | 7203905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | + |
|---|
| Start bp | 1162188 |
|---|
| End bp | 1164181 |
|---|
| Gene Length | 1994 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | UDP-glucose 6-dehydrogenase |
|---|
| Protein accession | XP_002186195 |
|---|
| Protein GI | 219113223 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACGGAATAC AAACGGTACA ACTCCCATCT TCCGTCGTCC CCATTGTCCT TTATCGTTGC
ATACTGTTTC ACGTTCCAAC GGATCGTCAC ACAAAGATAG CATAGTTGCT GCCCATTACC
ACTACAAAGT ATTATAATCC AAACTACAAT CAAACGACAC TTGAAAGTAT GAGTGACGAC
TGGGATCTCA AGATCTGTTG CATGGGCGCC GGCTACGTCG GAGGTCCCAC CATGGCCGTG
ATTGCCAAAC AATGTCCCAA GGTCCGTCAA TGTCGCTGTC AATCGAGCCC TGTCGATCGG
TGTATAGTTG TACAGAGTTT GTCTGTGTGT GCGTGTGTGT GTATTGTGGT ATCTTTGGTC
GACTGCACCC GCAGTACTCG CGACTGCAGA CCAATCAACC GACCAATCGA TTCCTGGTAT
ATTCCATGCC AACCAGGAAG TCACGCCACG CCGCATCGTG AATTCTCTCT AAAACACACA
CACTCACACG TAATCCTACT CCTCCACCTT TCTAGATCCG CGTCTGCGTC GTCGATCTTT
CGCAAAAGCA GATTGATGCC TGGAACACTG ACGAGTTGCC CATTTACGAG CCGGGTCTTT
TGGAAGTCGT CCAAGTCTGT CGCGGCAAGA ATCTCTTCTT CTCGACGGAC ATTGACGCCG
AGATTCAAAA GGCCGACGTC GTATTCATCT CCGTCAATAC CCCCACCAAA ACGCAGGGAA
TCGGAGCCGG ACGGGCCGCC AACATCAAGA ACTGTGAACT CTGTGCGCGC AAGATTGTGG
AAGTATCCAC CACCAACAAA ATTGTCGTCG AGAAGAGTAC CGTACCCGTG CGTACCGCAC
AGGCCATTAC GCGGGTCCTC AAATCCAACG AAAAAGGACT CGAGTTCCCC GTACTCTCCA
ACCCAGAGTT CCTCGCCGAA GGAACGGCCA TGGCCGACCT CATGAACCCC GATCGCGTAC
TCATTGGTGG ACAGCAGAAC GAAGCCGGTC TCAAGGCCGC ACAAACACTC GTTAGTGTCT
ACGCAAACTG GGTCCCCCGC GAACAGATTC TTACCACCAA CTTGTGGAGT TCCGAACTTT
CCAAGTTAGT GGCCAACGCA TTTCTGGCTC AGCGCGTTTC CTCCATTAAC TCCATTTCGG
CGCTCTGTGA AGCCACCGGA GCCGACGTTT TGGAAATCTC ACGAGCCGTC GGAATGGACG
CCCGCATCGG CAATCGCTTC CTACAACCCT CGGTTGGGTT TGGGGGATCC TGTTTCCAGA
AGGACATTCT CAACCTAGTC TATCTCTGCG AAACATACGG TTTGGACGAG TGCGCCACCT
ACTGGAATCA GGTCATTCTC ATGAACGACT ACCAGAAGAA ACGCTTTTCC GAAAAGATTG
TGGCCAAAAT GTTCAACACC GTCACGGGCA AGAAAATCGC CTTGATGGGC TACGCCTTCA
AGAAGGACAC GGGCGACGTC CGCGAGACCC CGTCCATGTT TGTCTTGCGT GACTTGATTC
AGGAACAAGC CAAGATCTTT GTCTACGACC CCCAGGTCAG TCGCGAAGAC ATGTGGTCCG
AAATGGACTA CACTTGCGGT GTCAACCACC AAAACACGCC CGGCCTCGAC GACGCCGTCG
TCACCGCCAC CGACCCCTAC CAAGCCTGTG ACGGCGCCCA CGCCATGGCC ATCCTCACGG
AATGGGACGA ATTCAAGACC CTCGACTTTG ATCGCATCTA CAAAAGTATG GCCAAACCCG
CTTTCTTGTT CGACGGACGC AACCTTTTGG ATCACGAAAA ACTCCGCGAT ATGGGCTTTG
AAGTCCACGC CATTGGCAAA CCCGATCCCA CCGCCTTTAC CGATCTCTAA AGGAGAAGTA
ACCGTATAGT GGTTCCTTGC GTGGAGGCGT GGGTCATCGG GTGAGAGCCA CAACCCCCCG
ATATTTGATG CCGCACTCTT GATACAAAAG CACGAAATCC GTAAACAGTA AACAAGCAAA
CAAAGGTTGT TTGT
|
|---|
| Protein sequence | MSDDWDLKIC CMGAGYVGGP TMAVIAKQCP KIRVCVVDLS QKQIDAWNTD ELPIYEPGLL
EVVQVCRGKN LFFSTDIDAE IQKADVVFIS VNTPTKTQGI GAGRAANIKN CELCARKIVE
VSTTNKIVVE KSTVPVRTAQ AITRVLKSNE KGLEFPVLSN PEFLAEGTAM ADLMNPDRVL
IGGQQNEAGL KAAQTLVSVY ANWVPREQIL TTNLWSSELS KLVANAFLAQ RVSSINSISA
LCEATGADVL EISRAVGMDA RIGNRFLQPS VGFGGSCFQK DILNLVYLCE TYGLDECATY
WNQVILMNDY QKKRFSEKIV AKMFNTVTGK KIALMGYAFK KDTGDVRETP SMFVLRDLIQ
EQAKIFVYDP QVSREDMWSE MDYTCGVNHQ NTPGLDDAVV TATDPYQACD GAHAMAILTE
WDEFKTLDFD RIYKSMAKPA FLFDGRNLLD HEKLRDMGFE VHAIGKPDPT AFTDL
|
|---|
| |