| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_18549 |
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| Symbol | |
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| ID | 7204174 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | - |
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| Start bp | 504413 |
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| End bp | 509119 |
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| Gene Length | 4707 bp |
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| Protein Length | 1250 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186361 |
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| Protein GI | 219113555 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AACTGGCGCC TTACGGATCG AACCAGGACT GTGGGAATCG GTCTCGTCTT GGCCCTCAAT
TTAGGTATGG ATCCTCCAGA TGTTGTGGAT AAACCTCATC CCTGTGCAGT GCTTCATACT
TGGATCGACC CCAACGCCGA ACGTGCGGCC ACGGCACGCG AAAAAATCGG AGAACGCCTT
GAGCAACAGT ATTCCAAGTG GCAGACAGCC AGCACGGCCT GGCCGTTGCG CAAACGACGG
ACGGTAGATC CGACCATGGA AGATGTACGG AGCCTTTGCC AGCATCTCCG TCGACACGCC
CGGAACGAGA GAGTCTTGTT TCATTACCAC GGACATGGTG TGCCGAGACC AACCCACAAC
GGAGAAATAT GGGCGTTCGA CGCCAAGCGT ACAGAATACA TTGCCTTATC GGTTGCAGAT
GTTCGCACGT GGCTGGGAAA ACCCAGTATT GTAAGTGTGT ACTTTTGGCA GATGTTCGGT
AGCTGTTGAG TATCTACTGA CGATTTTTAC TTCATTCGTG ACTATTACCG GCCAAGGTTG
TTTTGGACTG TTCCTCCGCT GGCGTGCTAG TGCCTTTCTT TACGGCGCCA ATGGCCGATC
CTTCGGTTGC ACCCTCCTCG ACACCATCGC GAGCTCAGAC CGAACCGACA AATCTCAGGG
AACAAGCATC GGAGTGGGTT AGCGACACAG TCGTACTATG TCCTTGCTCT GAAGGCGAAT
GGCTACCCAT GAACCCAGAC TATCCCGTCG ACATTTTTAC GTCGTGTTTA ACCACTCCAC
TCAAGATTGC TCTTCGGTGG TTCATTCAAA GGAACCCCGT CAGCATGGCT TCCCTTCACC
CCGATGCAGT AGATCACATT CCTGGTGTTT TCAACGATCG AAAAACTCCA CTCGGAGAAT
TGAATTGGAT ATTTGCCGCC GTAACGGACT CAATTGCTTG GAACGTACTG CCCAAACCGC
TATTTCAGCG ACTTTTTCGT CACGACTTGC TGATGTCCAG TATGTTTCGT AACTTTTTAT
TGGCTGACCG AGTTCTGCGA TCGATGGGTT GCACCCCGGT ATCCTATCCT CCGTTGCCAC
CGGGCATTTC GAATCATCAA CTGTGGCAAT CTTGGGACTT GGCCTGTGAA ACAATGTTGG
TGCAGCTCAT GAATGACGGA GTGCTCGGAA ACCATCTGAT AGAAAGCAAA AGAAATCATG
ATGCAGAAGG CAGGGATGAT ATAGACGACG ATAAAAACGT GGATACGGCT CCGGCTCCTA
CAGAAAAGAC TTCCAGGCAC CCCACCAATC ACACAGTGAG TGTCTCATCA CCGTTTTTCT
CAGAGCAATT GACAGCTTTT GAAGTATGGC TAGAATTTAC GTCAATCCAT AAGATGCAGT
TGAAACTCGG AATGCTGGAG CCACCCGAAC CGCTGCCAAT GGTACTACAG GTCCTACTTA
GTCAGACACA CCGTATTCGT GCGTTGCACC TCCTTCGGCG GTTTTTAGAA TTTGGCCCAT
GGGCAGTTAA CCTGTCACTC ATTCTGGGAA TTTTTCCCTA CGTGTCGAAA TTGCTGCAAT
CTCCTGACTA CAAGAGCTTA TTGGTTGGTA TTTGGGCATC TATCTTGGCT TTCGACCCTT
CTTGTCGCGT TGACATGCTG AAAAACGGAA TTCTTCACCA CTTTGTCCAG TATTTGACAT
TGGACCCGGA TGCATATGGT TCAGTTAAAG AAGCCAAAGC CGCTCGGGAG CGAACCTTGG
CTGCGTTCGA CTTGTCCATT ACTTGCTGTG GTTACCCTAT GGGGCAGTCC GAATGTGTTC
GACTTCGCCT CCATAATCAT TTCTGCGCGC TCTTTTCTGC TTACGAAAAA ACAGAAAAAT
GTCAGTATGA CGATATGGAA CTTTATTTGC CAGCGCGCTT TCGACTTTGG TTATGTATTT
GCATCGCGAA TATGATGAAA GACAACAATG CAACGCAGGC TGAAGCGTAC AACGCTGGTG
TACATTCACG CCTATTTGTG CGAATGAGTG ACCAAGATCC GGACGTGCGA GCCGCAGTTT
GCTATGCTCT TGGTTGCCTC CTCGGTACTT CCGCGAAAAA TGAACAAACA GGGAAAAGTC
ACTCACTGCC GATTCAGAAC AACCCAGGTC AATACAGAGT ACCGTTCCAG TCTACCCCCG
CACTAAACCC TCAGCAACTT CAGCAAAGTG TTCCCGCGAC TACGGTACCG GGAGCCCTAA
AGCCAACCTT CATTTCCCAA GGTGGTACAT CGAGCCTTCA GTGGCGGCCC CGACAACTTC
ACTCTGTCCA AGGTGTTCCA TTTCCTGGGC AACCGATGGC ACCTCTTCAT GGTCAGTACT
TTACAGCGCA GCCGGGAGCT GGTCTGAACC AACAGCCTAT GCAAATGCAA TCACAAAACG
TACAAGAAAT GCAACCCCAG TACATGGTGC AGGGCCAGAC GCCTAATCCT TCTCCCAATG
TCAATAGACC CAGTGGCTTT CTGACCGGTG GTGGCTTGAT GAACCCGCAG GCGAAGCAAC
CTCTTCTTGA CGCCGACACT TTTCAGAACA GACCGATACT CGAGCAGCGG CAACTCAGCC
CGTCAGTTTA TGAAGATCAT CAACGACTCG ATCTAGATTT GTTAACGATT GAGGTCTTAT
TGAAAGCAGT TGAAGACGCG AGTGTTGTAG TACGGTACGA AGCTACACTC GGTCTAGCAC
GAGCAGTTGG AAAATATCTT GATGCCTTTG TATCCGTTGC CTCCACCGCA GCAAGCAATG
AAGATAGAAA TATGTATGTT TCTTTGCCTC CTGCCGTTGA TCTCAAAACA GGCGATCGTT
TTGCACTGGT TTGGAGCATC TTGCGGTTAT TGCAGCACAA TGACCCCTTT CCTTTCATTG
CTAAGGCGGC AAACGATATC GTGTGCGTAG TCTTTGAGCA TTTACTTCGC CGCCGATTGA
CTACCAGCGA TCGGGATGAC AAGGGGCGCC AGAGTCTAGC GCTGCGCGCT GAGAAACTGG
CATCAAATTT GACAGGGATC GAAGAGGAGC AGGACTCCGA TGGCATTGCG GGCCATTCTA
TCGATTCAAC TCCACCACTT AGCGAAGCCC CCACTCAGCA ACCCTCCGCC GTCATGCAAA
AGTCACCCCA AGCCGATCTA CGTCGCGTTG CTTCAGAATC TATAACAGGT AGGAACACAG
CTCACTCGAT GGAGCAGAAT GCCCTTGATA TGAATTTATC TGGAGTCTTA AAGGAAGATA
TGGTTAAAGG CGGTCCCGTA CATTACATAC TTCCGAAGTC TCAATTTTTC GAGTGGAAAA
GGGACTCTTT CGACATAAAC TTTGAGTTTG TAGATGATGA TACTCCAGCT GATACAGACC
CTCTCAGTCC TGAAGGCGCA GCAAAGATCT ACTTGGAGCG ACGGAACTTC TCGGTTCGCG
AAAACGCCAG AAAACTGTCG GATCGATATG CTTTGCTAGC ACCGAAACTT TCCGGCCCGA
AAGGAAAAAG TATAGAAGAA ATGCTTTACG AACAAGAAAG CGAGGATGCT TTGCTAGCAG
TAGAAGAAGA AGCCACTTTG AAAAAGGGCG AGCTGGAGCT ACAAGAAAAC ATGCTTTTAC
GCAACGAAGG AGTCAAGATG ACGTCTATGG TTCGGTTTCA TGCTTATGAA GATGTACTGA
TGGCTTGCGG CGCGTCAGAT GCCGTTTCAA TGTGGTGCAC AAACTCCGGC AAACAGCTTA
CGAAATTTCT CAATAGCAAA ACAAAAAAGG CTCGATTGAC TACATCGGCT TGGATCAATG
AACACGCATC CAGTCTTTTC ATGGTTGGCG GCGACACTGG CAACGTTCAC GTGTGGGGCA
ACCTCCTTGA GAGCAACGGA GAGGCATGCA GAACACCTGC CAAGTTGATC TCAGCCTTTC
AAGCCGCTCC CATGACAGCG GGACAACGCG GTAGTGGACT CATTTGCGAA TGGCAATCGT
ACAGTGGGAC ATTGTTGGCT GGTGGCAGCA GCAAGACTCT GCGCTGCTGG GATCTAGAAT
CGGAAAAACT TTCTAATCAA TTTGAGACCA ACACAGACGC AAACCTGACA ACTTTGACGA
CTGCTTGGGA TTACGATGAA CTTGGAATGG GGCCCGGGCC TAAAGGATAT CAAGGCATTG
GACAGGATAT CGTTGTCGGC GGTTTTAGCG ATGGAGCTTT GAGGATATTT GATATTCGCA
CCAACCAGGC AGGCAGTAGC TTGCAGTCTA GCCAACCTAC ACGACCTCGC CGAAAGAGAG
CTACTGAGTT TTCTGAACAC AAGACTTGGG TCGTTTCGAC TTCGTTCACT GCGTATGGAA
ACCGTTACGA GCTCATTTCG GGAACAATAT CCGGGGAAAT AAAGATTTGG GACTTACGTA
TGTCTTCAAG TATTCGAACA TTTGCTGCAC AGAGAAGCAC CATGACGAGC TTTGCGGTCC
ACTCGAAGAT TCCAATACTG GCCACTGGAT CGCACGCTCA GTTCATTAAG TTATTGACTC
TGGACGGCGA CGCATTCCAG GTCATGCGGT ACCACGGCAA AATGGCGAGT CACCGGATCG
GACCGGTGAG CTGCCTTGCA TTCCATCGTT TCAAACCCAT GCTTGCGGCT GGAGCGACGG
ACGCTTACAT TGGACTCTAC ACTACCAAGA AAAGATTCAT TTAAACAGTT ACATAAATTG
TGTAAATTGT AGAACAATAC TGAATTG
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| Protein sequence | MDPPDVVDKP HPCAVLHTWI DPNAERAATA REKIGERLEQ QYSKWQTAST AWPLRKRRTV
DPTMEDVRSL CQHLRRHARN ERVLFHYHGH GVPRPTHNGE IWAFDAKRTE YIALSVADVR
TWLGKPSIVV LDCSSAGVLV PFFTAPMADP SVAPSSTPSR AQTEPTNLRE QASEWVSDTV
VLCPCSEGEW LPMNPDYPVD IFTSCLTTPL KIALRWFIQR NPVSMASLHP DAVDHIPGVF
NDRKTPLGEL NWIFAAVTDS IAWNVLPKPL FQRLFRHDLL MSSMFRNFLL ADRVLRSMGC
TPVSYPPLPP GISNHQLWQS WDLACETMLV QLMNDGTSRH PTNHTVSVSS PFFSEQLTAF
EVWLEFTSIH KMQLKLGMLE PPEPLPMVLQ VLLSQTHRIR ALHLLRRFLE FGPWAVNLSL
ILGIFPYVSK LLQSPDYKSL LVGIWASILA FDPSCRVDML KNGILHHFVQ YLTLDPDAYG
SVKEAKAARE RTLAAFDLSI TCCGYPMGQS ECVRLRLHNH FCALFSAYEK TEKCQYDDME
LYLPARFRLW LCICIANMMK DNNATQAEAY NAGVHSRLFV RMSDQDPDVR AAVCYALGCL
LGTSAKNEQT GKNLLTIEVL LKAVEDASVV VRYEATLGLA RAVGKYLDAF VSVASTAASN
EDRNMYVSLP PAVDLKTGDR FALVWSILRL LQHNDPFPFI AKAANDIVCV VFEHLLRRRL
TTSDRDDKGR QSLALRAEKL ASNLTGIEEE QDSDGIAGHS IDSTPPLSEA PTQQPSAVMQ
KSPQADLRRV ASESITGRNT AHSMEQNALD MNLSGVLKED MVKGGPVHYI LPKSQFFEWK
RDSFDINFEF VDDDTPADTD PLKMLYEQES EDALLAVEEE ATLKKGELEL QENMLLRNEG
VKMTSMVRFH AYEDVLMACG ASDAVSMWCT NSGKQLTKFL NSKTKKARLT TSAWINEHAS
SLFMVGGDTG NVHVWGNLLE SNGEACRTPA KLISAFQAAP MTAGQRGSGL ICEWQSYSGT
LLAGGSSKTL RCWDLESEKL SNQFETNTDA NLTTLTTAWD YDELGMGPGP KGYQGIGQDI
VVGGFSDGAL RIFDIRTNQA GSSLQSSQPT RPRRKRATEF SEHKTWVVST SFTAYGNRYE
LISGTISGEI KIWDLRMSSS IRTFAAQRST MTSFAVHSKI PILATGSHAQ FIKLLTLDGD
AFQVMRYHGK MASHRIGPVS CLAFHRFKPM LAAGATDAYI GLYTTKKRFI
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