| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_18489 |
|---|
| Symbol | |
|---|
| ID | 7204284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | + |
|---|
| Start bp | 264327 |
|---|
| End bp | 265442 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186029 |
|---|
| Protein GI | 219112891 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0358222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGACA CGAAGAAAAG CAATCCAATT CTCGCTATGG CGGCGGGGTG CATCGCCGGT
GGCATTGAAG CTACTTGCGT TTGGCCGATG GAATACATCA AGGTAAGTGC TGACTGTGAC
GACGACTTTT CAAAGTCTAC GCCGGAGAAC ATTATTGTTG GGCAGAATTG CTCGCCCACG
ATTTTGCGTC AGACTCTCAA TGTTGTGCTT GTTCCTGGAT CTATTCTATG CCTCAATAAC
AGACGCAACT ACAATTGCAG TCCAAAGTCA AGGGCATCCA GCTCCCCTAC ACGGGCATGG
TTTCCGGTCT CAAGTATACC GTCAACACTA CCGGATTCTT TTCGCTCTAC CGTGGTCTCG
CTCCGACGCT TCTCGGTAGC ATTCCCAAAG CCGGAATTCG ATTCGGACTC AATTCCGTCA
TCAAAGACAG TTTACGGGAC AAGGATACGG GAGGGCTGAC CCCAGCCAAG AATTTCATCG
CCGGCCTCGG CGCCGGTGTA TCAGAAGCTC TTTTGATCGT CGCGCCAGTG GAAACGGTCA
AGACAAAATG TATCGAAATG AATATGGCTT TTCTGCAAGG TTTTCGACAC ATTTTGAAGC
ACGAAGGTCT TGCTGGTGTG TATCAGGGAG CGGCAGCGAC GGCATTGAAA CAAGGATCGA
ATCAGGGATT ACGATTCATG TGGTTCAACG AGTACAAAGT TATCGTCACG AAGGACGGAA
AGGAACCTAT GACTCCCCTG CTTGGTCTTT TCGGAGGTAT GAGCGCGGGT TGTTTCAGTA
CATTGGGCAA CAATCCATTT GATGTGGTCA AAACGAGAAT GCAAGGGACC AAGGCGGCCC
AGTACAACGG GACACTGGAC TGCTTCAAAC AGATTGTGTC CAAGGAAGGT GTGGGCGCGC
TCTATGCAGG TGTTGTACCA CGACTTGGAA GAGTAGTGCC TGGGCAGGGT ATCATTTTTA
TGAGTTTTGA GACCATTCAA AATGCGTTGA AGAAACAATT TACCATCTTC CAGACGTAGC
TGCTTTGTCC GACGAACTCT ATCCGCGATC TGTTTCGATA TGGGCTTCAA GCACCGTGTA
TAATAAAATG TATTCCTAAT ACCTGTATGT TTATGC
|
|---|
| Protein sequence | MADTKKSNPI LAMAAGCIAG GIEATCVWPM EYIKVSADCD DDFSKSTPEN IIYTVNTTGF
FSLYRGLAPT LLGSIPKAGI RFGLNSVIKD SLRDKDTGGL TPAKNFIAGL GAGVSEALLI
VAPVETVKTK CIEMNMAFLQ GFRHILKHEG LAGVYQGAAA TALKQGSNQG LRFMWFNEYK
VIVTKDGKEP MTPLLGLFGG MSAGCFSTLG NNPFDVVKTR MQGTKAAQYN GTLDCFKQIV
SKEGVGALYA GVVPRLGRVV PGQGIIFMSF ETIQNALKKQ FTIFQT
|
|---|
| |