Gene PHATR_18458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_18458 
Symbol 
ID7204269 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp181367 
End bp182843 
Gene Length1477 bp 
Protein Length194 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186294 
Protein GI219113421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAATCTCGTG AAAACAGTCA AACATACCCA GATATACCAT GCAGCGCTTC TTCTTAGCTC 
TTCTTGCTTT CCTGGCCTTG ACGGCTGCTG AAAGGTAAGG TCTCGGCACG TCCGCGTGAC
GGTCCATGTC GGTCATTTAG TTTCGCCATT GTGACCAGGA GGAAGGACTC ACCGGCTACG
ACTGTTCTTA CTTTGGGTAT TTGTGACAAT GGCATAGCGA CGTGAAAATC ACTACCAAGG
TATTTTTTGA TGTGGAAATT GAGGGAGCCC CGGACAGTGG CGGTCGCATT GTCATGGGGT
TATTCGGCGA CGTGGTCCCC AAGACCGTCG AAAACTTTCG TTCCCTTTGT ACGGGTGAAA
AGGGTGTGGG TAAGGCCGGC AAGCCCCTGC ACTTTAAGGG GTCTATCTTT CACCGCATTA
TGTAAGTCAG TCTGTTTGTG ACTGGTAGTT TGTTTTCTGA GACACCGTTT TGCGACTCAT
GTTTGTTGCC ACAAATTTCA GTCCCAACTT TATGATCCAA GGAGGAGGTA AGTTTCAGCG
GCTTCCAAAT AGCTCCATGC TACAAATTAT TGAGAACTGT ATATCTTATA TTGGCGTGGC
CCGTCTTTTC CAGACTTTAC CCAGGGCAAT GGACGAGGTG GAGGTAAGCT TTTGTTGTTA
CGATTCTTCG ACGCCAATCG GGAAGGATAT CGCTGCTACG GCCGCACAGA AAGTCTTCTC
AATACAATTC TACTAACTGT AACTTTTCCG TTCTCCGCCC TATGTATAGA ATCCATCTAT
GGCGAAAAGT TTGCCGACGA AAACTTTGAA CTCAAGCACG AGGGACCACT CTACCTCAGC
ATGGCCAACG GTAAGAACGT TCGGATACCA CACTAGCAAC CAATGGTCCT ATTCGTGGCT
CGAGTTTTTG GTATCTTTGC AATGACATTT TCCCAATTGA GTCTCACACC TGCCAACTCC
TGACTTTACT CGCCTCGCGT TCCACTTGAA GCCGGGCCCA ACACGAACGG ATCGCAATTT
TTCATTACGA CTGTCAAGAC GTCGTGGTTG GACGGTCGCC ACGTGGTGTT TGGCAAGGTA
TGTGGGTTAA GGTATCACAC GCCAGCCGGT ATATTTTGGA AAAGGGAAGG ACGGGAACCT
GTGCAGCCCG GTCAACGGTG ACCAAGATGA GAAAATTCCG TTGTGATTTC GTTTCGGGTG
CCTAGTAGGG ACTTTGTTTT GTGACACGAA AGACTAACTG TAAGCTCACC TCTCGACTAA
CTTGTTTTGT CTTTTACAGG TTTTGGAAGG AGAAGACGTA GTCAAGGCCG TCGAAGCCCA
GGGCACGAAC TCAGGGCAGC CCAAGGCCAA GGTTACCTTG GTTGATTCTG GTGAAGTTTA
AACTCGGGAG AAACAACTGA AAAATATACC GTAGTCTTTA GAACCTGGTC CAGCTGATCC
TAGAAACTGA TATAGACATG TGGATTTTTT TGAGTCA
 
Protein sequence
MQRFFLALLA FLALTAAESD VKITTKVFFD VEIEGAPDSG GRIVMGLFGD VVPKTVENFR 
SLCTGEKGVG KAGKPLHFKG SIFHRIIPNF MIQGGDFTQG NGRGGESIYG EKFADENFEL
KHEGPLYLSM ANAGPNTNGS QFFITTVKTS WLDGRHVVFG KVLEGEDVVK AVEAQGTNSG
QPKAKVTLVD SGEV