Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_10655 |
Symbol | |
ID | 7204039 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 1000197 |
End bp | 1000968 |
Gene Length | 772 bp |
Protein Length | 230 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186443 |
Protein GI | 219113719 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.451617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTGA CTTTGAAAGT CTTGTCCTGC GCACCTAGGG CCTTCGAAAT CGAAAACTTC CTATCTCGAC AGGAAGTTGA GCATATTGTG CAACTTGCTT CGGGTGTTGA TCTCAAACTC TCGTCTACCG GTGACATAAC TGGTCACAAG GAAACACCCA AAGAATTACA GACAGACTCC CGACGCACAC GAACTTCCTA TAACTCTTGG GTACCGCGCG AAAAGTCACC GATCATCGAC GCAATTTACC GGCGGGCTGC CGACGTCATG CGCATTGATG AAGCTCTCCT CCGTCATCGT AGCGACCATA CCGAATGGAC CAACTTGACT TCTACCAAGC CTTTGGCAGA ACAGCTACAA CTGGTTCACT ATGGACCCGG CCAAGAGTAC ACGGCCCATC ATGACTTCGG CTTCTCGCGC ATCGATGATC AGTTTCAAGG GGCCCGCTTT GGAACTTTAC TTTTGTACTT GAATGAGGGC ATGACAGGAG GAGAAACGAG CTTTCCACGA TGGTCGAATG CAGAAACATT TCATGAACTA TCCATCAAAC CCGAAGTCGG CAAAGCGGTC TTGTTTTACA GCCAACTTCC TGACGGTAAT CTTGATGATG TAAGTCAGTA AATGAAAAGA CTGCAGCGTG TCCTCTGTTC GCTTTGTTCT CACTGTTTTC GTTATCCACT CCTTCCAGCT CTCCCACCAT GCGGCGAAAC CTGTCACGGA TGGAGAAAAA TGGTTGATCA ACTTGTGGAC ATGGGACCCC ATTTACGATT GA
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Protein sequence | MNLTLKVLSC APRAFEIENF LSRQEVEHIV QLASGVDLKL SSTGDITGHK ETPKELQTDS RRTRTSYNSW VPREKSPIID AIYRRAADVM RIDEALLRHR SDHTEWTNLT STKPLAEQLQ LVHYGPGQEY TAHHDFGFSR IDDQFQGARF GTLLLYLNEG MTGGETSFPR WSNAETFHEL SIKPEVGKAV LFYSQLPDGN LDDLSHHAAK PVTDGEKWLI NLWTWDPIYD
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