Gene PHATR_10458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10458 
Symbol 
ID7204365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp454193 
End bp454708 
Gene Length516 bp 
Protein Length171 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186348 
Protein GI219113529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.013689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCGA CAGACGCAAT ACTAGAGCCA GGTGATGCGT TGTTTGGTCG ATTTCGCATT 
CCCGCCGCTA GCGTATTTTT TCGATCCGAA AAAAAGTCTG TCGCCTTTGT CAATCTACGA
CCCATCGTAC CAGGCCATGT TTTGGTAATT CCCGAACGGA TTGTCCCGAA ACTTAGGGAT
CTACCGGAAG ATGAATACAT AGATTTATGG CTAACGACAA GAAAAGTACA AGAGGCGCTG
ACGGCACATT ACGGCTGTAC CGCTTTCAAC GTGGCCATCC AGGACGGCCG GGAAGCTGGC
CAATCGGTAC CTCACGTCCA TGTGCACATT TTGCCCCGCG TAGAGGGTGA CTTGGAAAGG
AACGACGAGA TTTACGACTC ATTGCAAGAA TGGGCTCCGC GACAAGAACT GAAAAAGACA
GTGCAGAGCC TTGAAGTGCC AGAAGATGGG GATCGCAGAG ACCGGACTGC ACAAGAAATG
GCCGACGAAG CAGCTCTGTA TCGGAACTCA TTTTAA
 
Protein sequence
MASTDAILEP GDALFGRFRI PAASVFFRSE KKSVAFVNLR PIVPGHVLVI PERIVPKLRD 
LPEDEYIDLW LTTRKVQEAL TAHYGCTAFN VAIQDGREAG QSVPHVHVHI LPRVEGDLER
NDEIYDSLQE WAPRQELKKT VQSLEVPEDG DRRDRTAQEM ADEAALYRNS F