Gene PHATR_10354 details

Gene Information

• Locus tag: PHATR_10354
• ID: 7204086
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 1151227
• End bp: 1153245
• Gene Length: 2019 bp
• Protein Length: 653 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002186193
• Protein GI: 219113219

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AAAGACATGG GCACTTGGTC CACGTACGCT CCCACCAACA CTGAACAGCA GCGAAGATTA 
CACCGGACTG TGTTGTTACT TCTCGTCCGG AGCCGCCTTT TGTCTGTACA CGATCTTGAT 
TCTTTTCTCG CCGCAAGGGC TGACAATGGT AGCAATCATA TATGGCTTGA ATTCTCCTTG 
CTCTTTATTC GTACTGCTTT CATGGAAAAA ATAGCTACAA CGGCTGACTT TCCGAAGCTA 
CTTGATTTGA TGAGTCAAGT CGCTGAGGGC AGGAGCGATG CAAGTGCTCA AATTCCGCAA 
TCTTTTCGAA AGCCAATCTT GCTGATGCTA GAGGAAGCTC GTGTTCCAGC TCTCCAGATC 
CACGCACCAG TTCCTGCGAG TGCGAGCAAG TCGGTAGAAA CGCAACGACT TGAAAGTAGC 
AGCAGTCTTT CGATTGTTTC TCTTGACACT TATTCGAAGG CATCGAAAAG AGTTGCTGAA 
GCAGTTGCGT CTTTCTTCCG AAACGATCCA ACAACTGCAA AGCAGCAAGT TACTGCCTTG 
CTAGAAGGGT GGATCCGTCT GCAGTCTGAG CCCTCTCTGA ACGAGAAAGC TCTCGCTCAA 
TACATGATTA TTTTGCAGCG CTTCGGGATG GGGAAAAACG AGGAGCAGAC GGAAAGGTTC 
CTCCGAAATT CTGTCATCAT TGTTGTCGAT GCTGCTCTCA AATCCAGTAC TCAGCGTGGA 
GACGGGAAGA AGCATATCAA TTACGTATTC ATAGACCACT TCGCCAAGCT TCTCGGTATT 
CTTGTTCGTC ACATGAACGC AGGAGGCTCA GCCGACCAAG TAAATGCTCA GCGCCTGGGA 
GTTCTCAACA AGATTCTTGG GACAATCGTC AGGTCGATGA TGTGGCACTA TGAAAGTAGT 
ATGGAAGGGT CTGCAAACCC GTGGGACCAG CGTCCGTGGT TTCGTCTCTT GCTCAATCTT 
GTAATTGATC TAAACAAGCC GGATCCTGTA TTTGAGGCTG TTCGTCTCGG CATTTTGAGT 
GTTTTCGGAG CCGCCTTTCA CGTATGCCAA CCAATGATAT TTCCAGCTTT CGCATTCTCA 
TGGCTCGAGC TTGTGTCGCA TAGGCACTTC CTTCCTAACC TGATTTTGTT CTCCGACGAA 
AAGGGATGGA ATGTCGCTCA TCAATTACTG ATTGACCAGC TTCTTTTCTT GGAACCTTCG 
CTAAGGCGAG TTGAACTCAC TGTACCCGTC AAAAAGCTAT ATGAAGGGAC CTTGCGTGTT 
CTGCTTGTTT TACTTCACGA TTTCCCAACT TTTCTCGCCG GTTTTCATCT CAGCTTCTGT 
AATGTTATTC CCGAAAGCTG CGTACAGCTT CGTAACATTA TTCTGTCTGC CACTCCGAAG 
GCCATGAATC CTCCGGACCC GTTCACTCCA AATCTCAAAA TCGATTTGCT TCCCGAGATC 
TCTCAAAGTC CTACAATTTT GTCGAATATT CTTAGTCCAA TCGCTTCCTT TCGTGGGCAT 
CTCGATGCGT TCCTAAAGGA TGGACAGCGT CGGAACTTTC TCTTGGAGCT TCTTCCTTTG 
CTTCATCGTG ATGGTGGAGC TGAAATTGAC GTGCCGAAAG TCAATTCTTT GGTTGTTTAT 
GTTGGAGCGC ATGCACTGGC GAGGCTTCAA AACTCACAGA TTTCTCTGAC GCGTACTCCG 
GAGATGGAGG TAATCCAGAA ACTAATGGAA CTAGAAGATC GGGGGCGCTA CGTTTGCCTG 
AATGCAATCG TGAACCAGCT AAGATATCCG TCGAGTCACA CGCACTACTT TTCCTGCGTC 
GTGCTCTATC TCTTCAGCGA GTTCAAGAGC GTCGCTGTGA AGGAGCAAGT AACAAGGGTA 
CTGCTCGAAC GCCTTATTGT AAATCGCCCT CACCCATGGG GTTTGTTGAT TACGTTCATT 
GAACTCGTCA AAAATCAACG CTATGGCTTT TGGAATTATC CTTTTACACG CTGTGCCACT 
GAGATTGAGA AAGTCTTTGA ATCAGTTGCT CGTTCCTGC 

 

Protein sequence

KDMGTWSTYA PTNTEQQRRL HRTVLLLLVR SRLLSVHDLD SFLAARADNG SNHIWLEFSL 
LFIRTAFMEK IATTADFPKL LDLMSQVAEG RSDASAQIPQ SFRKPILLML EEARVPALQI 
HAPVPASASK SVETQRLESS SIASFFRNDP TTAKQQVTAL LEGWIRLQSE PSLNEKALAQ 
YMIILQRFGM GKNEEQTERF LRNSVIIVVD AALKSSTQRG DGKKHINYVF IDHFAKLLGI 
LVRHMNAGGS ADQVNAQRLG VLNKILGTIV RSMMWHYESS MEGSANPWDQ RPWFRLLLNL 
VIDLNKPDPV FEAVRLGILS VFGAAFHVCQ PMIFPAFAFS WLELVSHRHF LPNLILFSDE 
KGWNVAHQLL IDQLLFLEPS LRRVELTVPV KKLYEGTLRV LLVLLHDFPT FLAGFHLSFC 
NVIPESCVQL RNIILSATPK AMNPPDPFTP NLKIDLLPEI SQSPTILSNI LSPIASFRGH 
LDAFLKDGQR RNFLLELLPL LHRDGGAEID VPKVNSLVVY VGAHALARLQ NSQISLTRTP 
EMEVIQKLME LEDRGRYVCL NAIVNQLRYP SSHTHYFSCV VLYLFSEFKS VAVKEQVTRV 
LLERLIVNRP HPWGLLITFI ELVKNQRYGF WNYPFTRCAT EIEKVFESVA RSC