Gene PHATR_10293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10293 
Symbol 
ID7204325 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp667689 
End bp668616 
Gene Length928 bp 
Protein Length289 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186106 
Protein GI219113045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0891574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATATC AGCTCGCAGG GACCTTCACT TTGCTGAGCT GTCTTATCAG TATGTGGCAC 
ATGACCGCCC ATTTGCGAAA GATGAACCAA CCTGACGTAC AACGTCGCAT TTTGGCGATT
CTTTGGATGT CACCGATCTA TGCTATTACA TCTTGGTTCA GTCTAGTATT TCACTCTGCA
GAGGGCTATC TCGCGATAAT CAAAGATGGC TATGAATCTT ACATCATCTA CCAGTTTCTG
TCCTTTTGCA TTGCCGTTCT GGGCAAAGGT GATCGCAATG CTGTCGTTGA TCTTCTGGCT
CGACGAGCGG ATCATATGAC CCCTCCCTTT CGACTTTTTG GAGTCTTTGA AATATGCTGT
TCTTGTTGCA GGCCCGATCC GTATGTGAAT GATCGTGCCT TGGCGGATGC AATTCTGTTG
CAGTGTCAGT TTTTCGCCTT GCAGTTCGTT TTCTTCCGAC CCTTGACGAC AACAGCCATG
GTAGTACTTG ATAAGCTGCA ATATTATGGA CTAGGGACGG GTCCGACAGA CTATCGATCG
CCACAGTTCT ATATTGTCAT TGTGCAGAAT GTTTCAATCT TTGTGGCGTT TGCAGGTCTC
CTTAAGTTCT ACCACGCTGT TGATCAAGAT CTTGCTTGGT GCCGGCCTTT CGCGAAATTT
CTTTGTATCA AAGGTGTCGT TTTTATGACA TTGTAAGTCA CGCGATATGA ATGCTGTTGC
CAATTGCTGT AACTTACCTT TCCCTTCAAA CAGCTGGCAA GGTCTCGCAT TAGGTATCTT
GGCGCAGACG ACAGATGTCG GTGGACAAGA TGCAGACGAA TGGGGCAAGT CGGCCCAGAA
CTTTCTAATC TGTCTCGAAA TGTTGCTGTT CTCAATAGCT CATTTCTACT GCTTTCCAAC
CGAAGAATGG GAAGAAGGAT ACCGGGTG
 
Protein sequence
MVYQLAGTFT LLSCLISMWH MTAHLRKMNQ PDVQRRILAI LWMSPIYAIT SWFSLVFHSA 
EGYLAIIKDG YESYIIYQFL SFCIAVLGKG DRNAVVDLLA RRADHMTPPF RLFGVFEICC
SCCRPDPYVN DRALADAILL QCQFFALQFV FFRPLTTTAM VVLDKLQYYG LGTGPTDYRS
PQFYIVIVQN VSIFVAFAGL LKFYHAVDQD LAWCRPFAKF LCIKGVVFMT FWQGLALGIL
AQTTDVGGQD ADEWGKSAQN FLICLEMLLF SIAHFYCFPT EEWEEGYRV