Gene PHATR_10291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10291 
Symbol 
ID7204364 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp447533 
End bp448498 
Gene Length966 bp 
Protein Length303 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186346 
Protein GI219113525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTC GTCATGTACA GCATGCACAG CTTTTGACGA CAATTGACCC AAAAGAGATT 
GAAATTCATA GAATCATTGG TGAAGGGAAC TTCGGTCGGG TATGGAGTGC TCGCTGGGGA
ACTGCGAGTG TCGCAGTGAA GGAGTTCGGG TTCGCTCAGG CTGCGGTTGC TGGAAAATCA
GTCATGCAGC AAGAGATCAT CGAAGAGATT ATAGGTGAAG CCGGCATGAT GGCAATCCTT
CGACATCCAA ACGTGCTGCA GCTTTTTGGG TGCTGCTTGA CTGCACAGGC CATTTGGATT
GTAAGTGAGC TATGTTCACT TGGCAGTCTT CGCCAATTGC TTGACGATAA CGATCGGATT
CTCTCAGTTG AGACAAGAAT CAACCTTATC CTCCAAGTAG CTGAGGGAAT GGCATATTTG
CACAGTCAAA TTCCTCCAAT TCTTCACAGA GACTTGAAGA GCCATAATAT TTTCGTTCAT
GAAACGTTCA CAAATGCAGA GGACAGTAGT GTTGCATCTG AAAAGCAGAA TCGCGGTCGC
ACGCACAATG ACCAATACGA AAAGATGGAC ACGCATTCAA CGATCATTGC GAAGATCGGA
GATTGGGGAT CGGCTAGGGC AACGTTATCG GGTTCGAAGA CTATGACCCA TGGTGTTGGA
ACAGCATGCT GGCTGGCGCC TGAAGTAATC AATCACGCCC GCGCCTCCGA ATTCAGTGAT
GTATATGGCT TCGGAATTAT TTTGTGGGAA CTGGCTACTC GGGAAGAGGT GTACCAAGGC
TTGGAGACGA CCCAGATTAT CGCAAAAGTC GCAAACGAAA ATCTACGGCC TCCTATACCG
CTTGACTGCC CTTGGAAGGA CATTATGGTG AAATGCTGGG CAGAAAATCC TCAAGATCGT
CTTAGATTCA TCGATATCAT CAAGGAGCTA CATGCGCTTA TGAAAAGGAT GGGGGAATCT
AGCTGA
 
Protein sequence
MKTRHVQHAQ LLTTIDPKEI EIHRIIGEGN FGRVWSARWG TASVAVKEFG FAQAAVAGKS 
VMQQEIIEEI IGEAGMMAIL RHPNVLQLFG CCLTAQAIWI VSELCSLGSL RQLLDDNDRI
LSVETRINLI LQVAEGMAYL HSQIPPILHR DLKSHNIFVH ETFTNAEDSS MDTHSTIIAK
IGDWGSARAT LSGSKTMTHG VGTACWLAPE VINHARASEF SDVYGFGIIL WELATREEVY
QGLETTQIIA KVANENLRPP IPLDCPWKDI MVKCWAENPQ DRLRFIDIIK ELHALMKRMG
ESS