Gene PHATR_10199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10199 
Symbol 
ID7204339 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand- 
Start bp310168 
End bp310936 
Gene Length769 bp 
Protein Length203 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186321 
Protein GI219113475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.478324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGTA TACAAAACAT GTCCAGTACT GTAAATCTAG GCACACGGGT ACGAGTATGA 
GAGTCCGGTA TCGTTTTCCG ATAGCATAAT GTATGTACTA ACTCTTGTCT TGTTCTTCGT 
ACGTTGCTGC AGCTGGATTT AAAGAAAATC GCGCTCAAAT GCCGCAACAC AGAATTCAAC 
CCCCGTCGCT TTGGTGCCGT AATCATGCGA GTAAGTTGAT CTTGCGTGAA AGTCATTCCA 
CTATTTTTTC TCCTCATCCT TTCGTTTTCT CTGCCAATTG CAGTTACGTG AACCCCGTGC 
TACCGCTCTG ATTTTTTCCA GCGGTAAAAT GTGCGTGACC GGAGTCAAGA GCACACACAA 
CGCCAATCTG GCGGCGAAAA AGTTTGCCTA CATTGTGGAG CGCGTCGGCT TCAAACCGAA 
AGAAAATATT GATTTCAAGG TCCAGAACAT TGTTGGGACC GCCGACGTAG GCTTTCCAAT 
CCGGCTGGAA GGACTGGTAT ACGCGCATTC CGCCTTTGCC AGTTACGAGC CAGAGCTATT 
TCCTGGGTTG ATTTATCGAT TTGTCAATCC ACGAGTGGTG TTTTTGATAT TCGTGAGCGG 
AAAGATAGTC ATTACTGGTG CCAAGAAGGA AATGGACCTG GCGCACGCTT TGACAAAACT 
CTTTCCTGTT TTAATGGAAT TCAAAAAGAC ACATATAACT ACGGTACCCG GGGTTCCAGC 
AGCATCACTT CCCCCGACAG GTAAAACCGT GGACACAGAA TCTGTATAG
 
Protein sequence
MIRIQNMSST VNLGTRLDLK KIALKCRNTE FNPRRFGAVI MRLREPRATA LIFSSGKMCV 
TGVKSTHNAN LAAKKFAYIV ERVGFKPKEN IDFKVQNIVG TADVGFPIRL EGLVYAHSAF 
ASYEPELFPG LIYRFVNPRV VFLIFVSGKI VITGAKKEMD LAHALTKLFP VLMEFKKTHI 
TTVPGVPAAS LPPTGKTVDT ESV