| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_9896 |
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| Symbol | CCL1 |
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| ID | 7197367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 1125598 |
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| End bp | 1127169 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | coumaryl-coa ligase |
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| Protein accession | XP_002178079 |
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| Protein GI | 219112655 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCA GCTGGAAACC TCACGGCGGA TATTTGGACA AGCAGGTCGC CATTGTGGAC
GGCACCACAG GAGCACAGCG AACCTTTGCA GATCATCACA AAACAATTGG AGGTCTAGCT
GCTGCTTTAC GGGATGATAT GGATATTCAG GAGACAGACT GCGTTGCCTT GTACTGTCCA
AACCATGTCG ACTATTTACC GACAGCACTG GCCGTTTCCT TGACAGGAGC CAAGCTGACA
CCCATCAATC CACTGTATAC CCAACATGAA CTCGGAACCA TTCTAGAACG CAGCCGTAGT
TCGGTACTCA TAACGCACCA CCGGCTGTTG GATGTGGCAC TCCAGTCGGC AAGCCAAAGC
AAGTTTGTGA AACATGTGAT TGTGCTCACG GACCACGGCG AGGCCATTCC AGAAGGGACA
ATCCACTTGG ACAGTCTGCG GAATCATCCG CAAACTCTGC ATTGTACGGT TGCGCAAGTG
CACAAACAAA CAGACACGCA TCCTTTCTTA CTGCCCTACT CGTCAGGTAC GACTGGACTG
CCCAAGGGTG TTTGCCTAAG TCACCGCAAC TTGGTCGCCA ACCTACTACA GTACGATGAA
GTCGAAGGTA TTATCTTTGC TCCCGATCAA AAGGTGATAT CACCGCTACC ATTCTTTCAT
ATTTATGGCT TCTTGGCATC ACTGTTATAC TCGGCCTACA AGGGCATTAC ACTGGTGACA
ACTTCAGGTC GCTTTGATTT GGAGGAATTT TGCAAACTTG TGGAACAACA CAGACCATCC
AGAGCCCATC TCGTCCCACC CATTCTCATT GGGCTGGGCA AAAGTCCGGT GGTTGACCAG
TATGACTGCT CATCAATTCG CGTAATTTCG AGTGCGGCAG CGCCCATGGG TCCCGAAACC
GAAGACGCCG TTCAGAAACG TTTGCAATGT ACGGTCAAAC AAGCCTGGGG CATGTCGGAG
TTATCTCCGC TTGGTACCGT TAATTCGGAT TTCAATACCA AGTCAGGCAG TGTGGGACCA
CCTGTTTCTT CTACGTACGC GAAAATTGTG GACAAGCACG GATACAGCCT GGGGCCGCAC
CAGACAGGTG AACTGCTCAT CAAAGGACCA CAAGTCATGA TGGGCTACTT GGACGATCCG
GAAAAGACGG CCGAGTGTTT GACGGAATCG GGATGGTTAC GGACGGGCGA TGTAGCGTAC
TATGATGAGG AAGGTTTCTT CTTTATTACC GATCGCATCA AGGAACTTAT CAAAGTACGG
GGCTACCAGG TCGCTCCTGC AGAATTGGAG GCACTATTGT TGACGCACGA GGCGGTCAAC
GATACCGCCG TCATCCAGGT GGAAGACGAG TCGGCTGGTG AATTGCCGCG TGCGTACATT
GTTTTAGAAA ACAATGAAGG TTCACAAGCC ACGACCGCAA CCGTTATCTA CGAGTGGGTC
AAGGAGCGAG TTGCGCCGTA CAAACGTTTG GATGGCGGCA TTGAATTTGT AGACGCCATT
CCTAAATCAG CGAGCGGTAA AACATTGCGG CGAATTTTGC GAGATCGAGT CAAGGCAGCT
ACGGACCTAT GA
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| Protein sequence | MTTSWKPHGG YLDKQVAIVD GTTGAQRTFA DHHKTIGGLA AALRDDMDIQ ETDCVALYCP
NHVDYLPTAL AVSLTGAKLT PINPLYTQHE LGTILERSRS SVLITHHRLL DVALQSASQS
KFVKHVIVLT DHGEAIPEGT IHLDSLRNHP QTLHCTVAQV HKQTDTHPFL LPYSSGTTGL
PKGVCLSHRN LVANLLQYDE VEGIIFAPDQ KVISPLPFFH IYGFLASLLY SAYKGITLVT
TSGRFDLEEF CKLVEQHRPS RAHLVPPILI GLGKSPVVDQ YDCSSIRVIS SAAAPMGPET
EDAVQKRLQC TVKQAWGMSE LSPLGTVNSD FNTKSGSVGP PVSSTYAKIV DKHGYSLGPH
QTGELLIKGP QVMMGYLDDP EKTAECLTES GWLRTGDVAY YDEEGFFFIT DRIKELIKVR
GYQVAPAELE ALLLTHEAVN DTAVIQVEDE SAGELPRAYI VLENNEGSQA TTATVIYEWV
KERVAPYKRL DGGIEFVDAI PKSASGKTLR RILRDRVKAA TDL
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