Gene PHATRDRAFT_9879 details

Gene Information

• Locus tag: PHATRDRAFT_9879
• ID: 7197443
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 462252
• End bp: 462815
• Gene Length: 564 bp
• Protein Length: 188 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002177623
• Protein GI: 219111743

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.753142
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGGGC TTCGCCCGAA GCCACTTGCT ATTTTCTTTG ATTGCGACGA TTGCCTGTAC 
TTCGACGGAT GGAAAACTGC TAAGTTGCTC ACAGCCAAGA TTGATGAATG GTGCGTCAAC 
CATGGGTTGC GTCCTGGACA AGCCTATGAG TTGTACTTAC AATATGGAAC AGCCTTACGC 
GGGCTCTTAG CGGAGGGTTA CTTGGAAAAA ACAGATGAGG CTATTGACAG CTTTCTGCAA 
AGTGTTCACG ACCTTCCAAT AGCAGAGCTT ATTCCAAGAG ATGATGCTCT CCGAGAGATT 
ATGAGTGCTT TGGATCCTTC AATTCCGAAG TACATTTTCA CAGCGAGTGT GAGTGATCAT 
GCAAGACGTT GTATTGCTGC ATTGGGAATT GAGGATTTTT TTCTCGATAT TATCGACTGC 
AAAGTATGCG GGCTGGAAAC TAAGCACAGT CGCCACTCAT TCGAGATCGC AATGAAAATT 
GCAGGAGTCT CGGATCCAGA GCGTTGTCTA TTTCTAGACG ATAGTTTGAC CAATCTTAGA 
ACAGCTCGGG AAATTGGCTG GCGA 

 

Protein sequence

MYGLRPKPLA IFFDCDDCLY FDGWKTAKLL TAKIDEWCVN HGLRPGQAYE LYLQYGTALR 
GLLAEGYLEK TDEAIDSFLQ SVHDLPIAEL IPRDDALREI MSALDPSIPK YIFTASVSDH 
ARRCIAALGI EDFFLDIIDC KVCGLETKHS RHSFEIAMKI AGVSDPERCL FLDDSLTNLR 
TAREIGWR