Gene PHATRDRAFT_573 details

Gene Information

• Locus tag: PHATRDRAFT_573
• ID: 7197354
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: -
• Start bp: 1072274
• End bp: 1074430
• Gene Length: 2157 bp
• Protein Length: 665 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002178066
• Protein GI: 219112629

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGGATCTACA AGCAAGTGCG GGCTCGACAG AATGAGTTCA CCCAGTACCA GAAGGTGAGT 
TGAGCTTTCG TCGGTCAGGG ACACTAATCG ACGGTATGTT TATCTAATTG TTGTTCGCTG 
TGCCTCGTCC ACTTCCCTTT CTAGGCTACC CTTTTTACCG GAACATGGAA CGTCAATGCT 
AAAGGCAAGG AACAGGCATT AGATCCATGG ATATGTGCTA ACTGGGGAGC AAATCGCGAG 
TACGCGCCCG ACATTGTTGC TGTTGCGTTT CAAGAAATTG TGGATCTCAA CGCTGTCAAT 
GTAGCGGTCG ACAATAAGAC GCAACAACGT TCACACTTCT GGATTGAGCG TCTCAACATG 
ACTCTGAACA ACCCTCAGTT TACACAAAAC GATCCAAGCC GGAGTTACGT TCTTTTGACG 
CAAAAGTCCA TGGTCGGACT TTTGATCTGT GTTTTCGTTA AGGGTGCCCA TAAATCTCGT 
AGCCGCTACG TGAGTGCTGC CTCGGTTGGT GTAGGTGTTG GTGGGTTTTT GGGCAATAAG 
GGCGGTGCAA GTATTCGGTT ACAGTTCTAC GATTCAACCT TGTGCTTTGT TTGTAGTCAC 
TTGGCCGCCC ATCGAGAAAA TGTAGCGGGA CGTAACGCTG ATTTCGCAAA CGTGTTTCAA 
AAGACTTCGT TTCAAGTTGG AGAAGAAGCG ATTCGGGAGG TTATTCGATC AGGGTCTATG 
TCGCACTGGG TCATTGGATC CTCTTCAGTC GGAATCCAAG ACCACGATAT CGTTTTTTGG 
CTTGGCGACC TGAATTACCG CATCGACGAA TCAATGGGAA CCGAGAAAGT GCTGCAACTT 
TCAGAAAAAG GTACTTTCGA TGAGCTTCGA TCCTTGGACC AGTTGAACAT TGAGCGAGCG 
GCTGGTAGGG TGTTCGTTGG TTTCGAAGAG GGCCGGTTGA ATTTCAGGCC AACCTACAAG 
TACCAACCTG GTACAGACAT GTACGAGCAA CGACCTGACA AAAAACTTCG AGCGCCGGCA 
TGGTGCGATC GCATTTTGTG GATGGCACAG GAACCGAACT ACGTTCAGCA ATTGACATAC 
GGTCGAAGTG AGGAACCAAA TATTTCCGAT CACAAAGCTG TGTATTCCAC CTTTCGGGTT 
ACCGTCAAGG ACGTTGTTCA GCAAAAACGG GAAGCTATCT ACACTGATTT GATGAGACTC 
CTGGATAGAT ATGAGAACCA AACACTACCT GTCGTTGGTC TGGATCGGGT CAGTTTAGAT 
TTTGGGGAAG TACACTATGG CCAAAGTGTC ACACTACCGA TCCAGATTAC GAACACGGGG 
ACGGTTATCG CACAGTATCG CCTTGTTCCT AAGCTCGATG AGGTACGTCT TGCCATACAT 
ATCATGGTCG GTGCTTTGTA CGAGGATTGT ATCTGACATT ATTCGCTCTC CAAGAATGCT 
GTCTGCAAAC CTTGGATGAG AATCACCCCC ATGTTTGGCA TGCTAATTCC AGGTGACAAC 
CCGGCTTCGA TCGAATTCAC ACTGACTATT GACAATACCA CAGCCCAAAA TCTTAACTCT 
GGACGCGAAG TCTTGGAGGA TGTTCTTATT CTTCGTCTTG AAGGAGGTCG TGACTACTAT 
ATCAGCGTCA AAGCAACGTA TGCAAGATCT TGTTTCGGTA TGTCAGTCGA CGAACTTGCC 
CTGTATGCCG AACCAATCCG TTCCATTCCG CTCGATCCCA TCAAACGCGC TGAGAAATTC 
GATCCCAGTG CCGCTGCAGC ATTGTGTATA CCGAAAGAAC TATGGCGCGT TGTTGATGCA 
ATCCACGAAA AAGGGCTACA AACGGCGAAC TTGTTCATCG AGCCAGGTAT TCCGAACGAA 
GTGAACCAGA TTCGGGAGTG CCTCGACACG GGGAGTACCT TTGGCCATTT CGGTATACAC 
TCGTATGCAG AGATATTTGT TTCTCTTCTC TCTGGATTGT CTTCGCCAAT TGTGCCAGCA 
TCGCTTTTCC CCACAATAGA AGTGGACTCA CAGACGATTC AGGCTACCGC TCGACGCCTT 
TTGGAAGAAC TCCCTCCCAT TCATTACAAT ACTTTTGTTT ATGTCATTTC ATTCTTCCGT 
GAGGCTCTTC TGTTTCGCGA ACAAAATCGG TTATCGGCGA CGAAACTGGC CCGTATC 

 

Protein sequence

WIYKQVRARQ NEFTQYQKAT LFTGTWNVNA KGKEQALDPW ICANWGANRE YAPDIVAVAF 
QEIVDLNAVN VAVDNKTQQR SHFWIERLNM TLNNPQFTQN DPSRSYVLLT QKSMVGLLIC 
VFVKGAHKSR SRYVSAASVG VGVGGFLGNK GGASIRLQFY DSTLCFVCSH LAAHRENVAG 
RNADFANVFQ KTSFQVGEEA IREVIRSGSM SHWVIGSSSV GIQDHDIVFW LGDLNYRIDE 
SMGTEKVLQL SEKGTFDELR SLDQLNIERA AGRVFVGFEE GRLNFRPTYK YQPGTDMYEQ 
RPDKKLRAPA WCDRILWMAQ EPNYVQQLTY GRSEEPNISD HKAVYSTFRV TVKDVVQQKR 
EAIYTDLMRL LDRYENQTLP VVGLDRVSLD FGEVHYGQSV TLPIQITNTG TVIAQYRLVP 
KLDENAVCKP WMRITPMFGM LIPGDNPASI EFTLTIDNTT AQNLNSGREV LEDVLILRLE 
GGRDYYISVK ATYARSCFGM SVDELALYAE PIRSIPLDPI KRAEKFDPSA AAALCIPKEL 
WRVVDAIHEK GLQTANLFIE PGIPNEVNQI RECLDTGSTF GHFGIHSYAE IFVSLLSGLS 
SPIVPASLFP TIEVDSQTIQ ATARRLLEEL PPIHYNTFVY VISFFREALL FREQNRLSAT 
KLARI