| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_56624 |
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| Symbol | |
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| ID | 7197121 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 295208 |
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| End bp | 299525 |
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| Gene Length | 4318 bp |
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| Protein Length | 1301 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177904 |
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| Protein GI | 219112305 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.187837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGATCCGCTG GCACACTTCA GTCGGGGACA CACCGGATAG ACACCCGTTA GAACAATTGC
GCCGCTTCGC ACATTCTGTC CTCTCGATCT CGTACCATGA CGGCGGATGC CAAACCCTCC
TTACCGGCAA CCGAGGAATC TCCCGCCGAG ACAGAACTGC GTAGTCGCCT GGCTCGGACG
ATACAGTTGC GAGCAACGAC GCAGGTAGGT CGGACGATGC GACGGCATGC GCGAGTTGGC
GACAGAGAGA CTGCCGGGCA TTGTCACTTT GTTGTGTGTG GAAGGATGTG TGAAGCAATG
CATCCCAGTC CAACCGTTTG ATTCCATTTC ACTCGCTCAC GTTGTGTACT CTTTCACACC
AACCTACTTT TTGGGAACAG TTGGAACTCC GAAAGAGTCA AAAAGAACTG GAACGTCTCT
TGGTCGCTAT CCCTCCACGA CCCCGGCAAC CCCTCGCGGA CGTGAACGAA CAACTCCGGT
ACGTACCATC GCCAACGCCA CAAAAACGCC GACACATCGG TGCCCCCTCG CTCCAGTCGC
ACTCGCTCGG TAGCGCGATT TTCTCACTAG AATTCGATCC TTTTCTTCCC ACAGAACACT
GGAAACATAC CGTGAAACGC ACAGTCTCTC CTTGGCCGAG GAAAAGGCGT TGCTCCGGCG
AATACATTCC TTGGAAGCCG CGCGTTGCGT GTGCAACACT TACACGGCCG CTGACGTCGC
AATACGGTGC GAAAAGGCCC TCACGGCGAG TTTGCGCGGG TCGCTGCAAT CGCAAACGCA
ACAGATTGCC GCGCTAAGAG ATACCTTGCA AACGACCCGC ACGGCGCGGA AACTCGGTTG
CGACGTCGCG GAACTCCAAA AGGTGCTCGT AGACTGTCCT CCGGCTCAAC TAGGTCGGGT
CATTGGCAAG GACGGAAGCA ATGTACGGGC GTGGATGCAG AAGTACGGCG TGACCATTGA
CGTTGATCGG GAACGACACC AACTCGCCTT GAAGGGGTCG CACCAGGCTT TGGAATGCAC
CCTACCGGCC GTCCAGCGTA TAGTGGATAC AACGGAACGC GACTTATCCA CCCTTGTTTC
CACCAGTACG GTGGCCTACT GGACCACTAA ACACATTACC GCTCTGGAGG ATTTGCGATC
CCGCTATTCC CACGTCTACA TCGACATTCA AAGGGGCAAG CATCAAAAGC AGCACTTGGT
ACGGCTTCGT GGGATCCCGG TCGACTTGGA CAGCGTGCAG CACGAAATGG AACTTTGGCG
GATTGTGACG AAAACTGTGG CGGTAGACGC CGCCGCAGCA TCGGTCATCC TGGGCAAAAA
AGGAAATAAC ATTACCCGCA TGGTACAGAC GCATCAAGTG ACCATGGACG TTAGGAATCC
GAGTGGCAGT GCGAGCAACG ATCACAGCAA TGAGACCAAT AGCATGTCTA CCACCGCCAC
GACAAAGATG GAAATTACCG GACCGGTGGA CAACGTCACT GCAGCCGTAC AGGAAATCGA
ACAAATCATG GCCGACCACG AGCGAGTCGT GAAAACGGTA CCAGTGGATC GAAACGTGCA
AGAAGTCTTT TTGCATCAGA GTGGCCTGGG TATCAAAGCC ACACATAAAG TCATTAACGA
CGCGATTCAA ACTATTGCTC CTGGTGCGCT ACCCGTCAAC GTGGGCGACA AAGGGGACCA
AGGCGGTAGT ATTGTACTCA GAGGGAAGGC CATGTACATG GAAACAGCAG TATCCATGGT
AGAGAAGGAG GCTGCACGTG TACAAAACCT GATTGTCCAA ATTCGGGTCG ATCCTTTGGT
CATTCCACTC TTAATTGGAC CGAGTGGGAC CAACATTCGG AAATTGATGC AAAATCATCC
CGCAGCAACA CTGCTTATTG ATCGTGACGG GGGCATCGTA ACCATTGGTG GACTCGAGGC
CGCGCCAATA CAAGCCTTGC AGGCGGAGAT TGAGGCAATG GTCCGAGACA ATCAATTGGA
ACGTGTGAAG CTGGACGCTC AGACGTACCA TTCCGTGGTT GCCGCCGTAT TGCGCTCTTC
AAAGATAAAA GAAATGAACA AGTTGAATAT CAAATTATTT ACTCAAGACG ACACGAACGA
AATTGTCCTG CGCGGCAGTG CGGAGAGTCT GCCGCAAGCC GCATCGTTGG TGCGAGATGT
CATTTCAGAA AATTACATTG CAGAACTTGC GGTAGATGTC GATGATTTGA AAGTCTTATT
GGAGGGGGGT AAAAAGAGCC CGATTGTCGA ATTCTCCAAT TCATTTGGCG TGCAACTCAG
TTCGAATCGG GAAACACAAG TCGTTACGGT ACGAGGGCCT CAGGACAGGG TCAATGAAGC
TACAGCTGCA GTGAACAGTT TTTTATACGG CGGTGAAGGC CACAGAGTCG CCAAGATTCC
ACTGAATCGA GACGGTGCCG GTGTCGTCAT TGGTCGCGGT GGCAAAACCA GGATCGACTT
GGAAAAAAAA TACGGCGTCA CAGTCCAAGT ACATCGGACA AATGACCATG TGACGGTTCG
TGGGACGGCA GATGCTGTGG AGGATTGCAA CTTAGAAATA GCAAGATTGC TTTTGACTGC
TTCCGTAGTC GAAAGTCTGG ACGTCTCGGA AGAGCAATCT AAGGGTTTGA TCAGTGCTAG
ACTTGCAGCA CTGATTCAAA AAACTGTCCC CGTGCGCATA AGTGTAGGTG AAACCAAGGT
TACGGTACGC GGATGTAGGC ATGATGTCAA TGACGCTGTC GCCTTGTTGA AGGAGCAGTT
GTATGGTATC TATGAAGGAC GAATTGTGTT GGATATAGAC TACTTTCACA AGATGCAGGA
TGCCTGCAAA GATTTATCCC ATTTCACACG TATTAAAAGG AATTCGGGTG TTGAGCTATC
GGTGGACGAA AGCGCAGCAG CCATTGTTGT GACAGGTCAG CGAGAAAAGG TCAAGGGCGC
AAAGCTCCAG CTATTTTCCC TTTTTGGTTT TATTTTTGAT TCGTCGTTCA CGCAGCTTGC
CGTCCCTCCG GCTTCGCTAT CTACTATAGG ACAAGTTGCG GTACTGGCTG AGGTTTCATC
TGCTTCGGGT GGTGCATCTG TCCTGTTAGA TCGGGACACA CACGCGATTC TGATTTTCGC
CCAAGAAGCC TCCAAAGTTT CCAAGGCGAA GAATGAAATT GAGAAGCGAA TGCAATTATC
GTTAAGCCGA CTTCATGTGA TTGAACTCGA ATCATCCGAA GACTGGCTGG TAGCTACTAC
GATAGGAAAA GGCGGTAAAA ATATCAACGC GCTGCGCAAG CGCACTGGAT GCTCAATCGA
TGTCGATAGT ACCAAGAGAA AAATTGTTAT TTCGTCGGAA AATGAGCAAA GCTTCGATAA
CGGCCGGAAG GAAGTAGAAG ATTTTCTAGA GAAAGAGCGG CAGCGATGTG TATTTTGTGA
GATTCCGGAA CAATACTATC CGGCCTTCGT CGGGCGCGGA GGTGCCAACA TCAAGAAATT
TTCCGAAACT CACAATGTGA ACATTCAAAC CATGCGAAAT ACACCGGTCA AAGGTCTTCG
AATAACGGGC GAGAAAGACT TTGTTGCCGC TGCCAAAACA GCAATCCAGG AATGGATAGC
TTTCCGTCAG CAAGCCCGGG AAGAAGCCGA CATGAGCGAG TCAATGCCGT TGCGGCACGA
TCAAATTTCC GTGATCCTTG GTACGAAAGG GTCCACTGTT CGCTCATTAC AATCAGAATT
TGGCTGCCGT GTCAATGTAG AGCGGCAATC TCCATGCTGT GTACTTGTGC AAGGTGGCTC
CCCTGGAAAA CGGCAGGCAA CCCTTGCAAA GATCCGTGAG CTGCTGCTTT CCGATGCTGT
ACTAAAGTCA GAGAACCTCG AACGAAGCAA CGATCCCGGT AGCCATTTCA TAGAAATGGC
AGTACAATCT CAGTCAAAGG TACATCGCGA ACAGGTGCCA CAAACCCAAC GCAATGTAAA
GAAAAAAGGT GTATCATCAT GGACTGAATA TTTCCCAGTG CTCGACTCAG GGGCGGACGA
ACAGAAAACA GAAACGAGTT CTACATCGAC TTTTATAGAA AATACTAAAA ACGAAAGCCC
TTCCTGGTCG ACGATCGTTC AAATTCCTAC AATGGCCGGT GAAATCTCGA ACGACGTCAA
ACAACGCCGT TCGTTCGTCA GCATGGTCTC AGACGATGAT TGGGATGCCA CATCCGTCGG
CTCCGACCCC GCGGACCATC AGCTTAATGC GGAATTGCGA TACGAGTCTG ACGCATGCAC
GAAAGTAGCA CAACTCATGG GCAACTTACA GTAAAGTGCA AATGAGAGGT CTTGCTTG
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| Protein sequence | MTADAKPSLP ATEESPAETE LRSRLARTIQ LRATTQLELR KSQKELERLL VAIPPRPRQP
LADVNEQLRT LETYRETHSL SLAEEKALLR RIHSLEAARC VCNTYTAADV AIRCEKALTA
SLRGSLQSQT QQIAALRDTL QTTRTARKLG CDVAELQKVL VDCPPAQLGR VIGKDGSNVR
AWMQKYGVTI DVDRERHQLA LKGSHQALEC TLPAVQRIVD TTERDLSTLV STSTVAYWTT
KHITALEDLR SRYSHVYIDI QRGKHQKQHL VRLRGIPVDL DSVQHEMELW RIVTKTVAVD
AAAASVILGK KGNNITRMVQ THQVTMDVRN PSGSASNDHS NETNSMSTTA TTKMEITGPV
DNVTAAVQEI EQIMADHERV VKTVPVDRNV QEVFLHQSGL GIKATHKVIN DAIQTIAPGA
LPVNVGDKGD QGGSIVLRGK AMYMETAVSM VEKEAARVQN LIVQIRVDPL VIPLLIGPSG
TNIRKLMQNH PAATLLIDRD GGIVTIGGLE AAPIQALQAE IEAMVRDNQL ERVKLDAQTY
HSVVAAVLRS SKIKEMNKLN IKLFTQDDTN EIVLRGSAES LPQAASLVRD VISENYIAEL
AVDVDDLKVL LEGGKKSPIV EFSNSFGVQL SSNRETQVVT VRGPQDRVNE ATAAVNSFLY
GGEGHRVAKI PLNRDGAGVV IGRGGKTRID LEKKYGVTVQ VHRTNDHVTV RGTADAVEDC
NLEIARLLLT ASVVESLDVS EEQSKGLISA RLAALIQKTV PVRISVGETK VTVRGCRHDV
NDAVALLKEQ LYGIYEGRIV LDIDYFHKMQ DACKDLSHFT RIKRNSGVEL SVDESAAAIV
VTGQREKVKG AKLQLFSLFG FIFDSSFTQL AVPPASLSTI GQVAVLAEVS SASGGASVLL
DRDTHAILIF AQEASKVSKA KNEIEKRMQL SLSRLHVIEL ESSEDWLVAT TIGKGGKNIN
ALRKRTGCSI DVDSTKRKIV ISSENEQSFD NGRKEVEDFL EKERQRCVFC EIPEQYYPAF
VGRGGANIKK FSETHNVNIQ TMRNTPVKGL RITGEKDFVA AAKTAIQEWI AFRQQAREEA
DMSESMPLRH DQISVILGTK GSTVRSLQSE FGCRVNVERQ SPCCVLVQGG SPGKRQATLA
KIRELLLSDA VLKSENLERS NDPGSHFIEM AVQSQSKVHR EQVPQTQRNV KKKGVSSWTE
YFPVLDSGAD EQKTETSSTS TFIENTKNES PSWSTIVQIP TMAGEISNDV KQRRSFVSMV
SDDDWDATSV GSDPADHQLN AELRYESDAC TKVAQLMGNL Q
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