Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_56501 |
Symbol | ME1 |
ID | 7197107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 236007 |
End bp | 237923 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177890 |
Protein GI | 219112277 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.511026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCAT CGGCGTGTCG TGGCAGCCTG AAATCCCTCT GTAGCGTCCA ACTGAGGAGC AATACTCGCC AACATGCGTC GTTGATCAGC TGTAACAATT CTCCTAACGT GAAGAGATTT TCTACTGCCT TTAGCAGTCA GACAGACGGA GAGGTCTTGA CTGTCGGTGG CGCTCTCTCA GGGGAAGAAC CCATACACGA GACAGGAGAA TGGGCCGGCT GCAAGAGAAG CTTTATGATA CCAATAAGGA TTTCGGTCCG TGGCACCGAT ATCCTGCTTG ATCCTTTATA CAACAAAGGA ACTGCGTTTA AAACGGGTGA ACGCGATCGT CTTCGATTTC GCGGTATGCT TCCACATCGT ATTATGAACA TCCATTTGCA AAAAGAGCGA TTCCTGCAGG CCTTACGCGC TGAAGATAGC AACATTCGTA AGAACGTCAT GCTCGAAGAC CTACACGATC GCAATGAAAC CCTTTACCAT CGGGTATTGG TCGATCACAT TGAGGAGATG GCTCCTTATA TTTACACACC TACCGTTGGG CAGGCTTGTA TGGAGTTCGC GACACGGTAT CGTCGTCCGC GGGGTATGTA CTTCACAGAA GAAGATCGGG GTCATATGGC CGCGATGGTT TACAACTGGC CGCACCGGGA TGTCCACGTG ATTTGTGTGA CGGACGGCAG TCGTATCCTT GGTCTTGGTG ATCTGGGTGC CAACGGTATG GGAATTCCAA TTGGGAAACT AGCCTTGTAC TGTGCTGCCG GTGGGATTGC ACCACATCGG GTGTTGCCGG TTGTTTTTGA TGCTGGGACC AACAATGAAG CTCTGTTACA GGACAAGTAT TATCTCGGTG TGCAAAGGAA ACGATTGAAA GGTGCAGCTT ACTTCCGTAT GATGGATGAG TTCATGGATG CGGTTCGCTT TCGATGGCCC AATGTATTGG TGCAGTTTGA GGATTTTTCG AGCGAAGTCG CCCAAACCCT ACTGGATCGC TACAGAGACG ATCATCTTTG CTTTAACGAT GATATACAGG GAACGGGTGC AACCACGCTT GCGGGTGTAC TTGGAGCTCT TCGCGCCAAG GGGGAAGAGG TTACATCTTT AGGTGATCAA CGTATTGTCA TTGCTGGTGC GGGTAGTGCC GGTATAGGTA TCGCCCAAGT CTTGATGCAA GCAATGGAAG AGCAAGGACG GACACCAGAG GAAGCCAAGA ACGCATTCTA TATTCTCGAT CAGAACGGGC TTCTGGGTAC TGACCGTGCC AACGACTTAA ATGCTGAACA GCGCGTGTTT GTGAGATCTG CCGACAACAA CCTGTCGCTG ATGGATGTGG TAAAAAAATA CAAACCTACG ATCCTTCTCG GCGTTACAAC AGTCGGTGGA TTGTTCACTG GAGACCTAAT TCGGGAGATG CACTCTAGTT GCGAGCGCCC TATAATATTT CCGCTTTCCA ACCCGACAAA CAAGGCTGAA TGTACAGCAG AGCAAGCTTA CGAATGGACA AACGGACAAT GCATCTTTGC ATCGGGGTCG CCATTCGATA CGATCGAGTT CGAAGATGGC CGCGTTTTCT ATCCCTCCCA ATGCAACAAC ATGTATGTAT TCCCGGGTCT GGGGCTGGGA GCATCAGTTT GCGGTGCTCA AAAAGTTACA GACCGCATGC TCTACGTCGC AGCAGAAACG TTGGCTAATT TTGTTTCCAA AAAGGACATG GAGGAGGGGC GTCTTTTTCC TCAACTGACA AGAATTCGTG AGGTCTCGCA CCGTATTGCC GTAGCAGTTG TGGAGGAAGC CCTGCGGGAG GGCTTGGCGA CAAAGGTAAA ACCTGCCGAT GCCAATGATC TGGATTCTTT TGTTGGGCGA AAAATGTACT TCCCCGAGTA TGTTCCTTTG GTGGAAAAAC GAGAAATATC AATCTAG
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Protein sequence | MISSACRGSL KSLCSVQLRS NTRQHASLIS CNNSPNVKRF STAFSSQTDG EVLTVGGALS GEEPIHETGE WAGCKRSFMI PIRISVRGTD ILLDPLYNKG TAFKTGERDR LRFRGMLPHR IMNIHLQKER FLQALRAEDS NIRKNVMLED LHDRNETLYH RVLVDHIEEM APYIYTPTVG QACMEFATRY RRPRGMYFTE EDRGHMAAMV YNWPHRDVHV ICVTDGSRIL GLGDLGANGM GIPIGKLALY CAAGGIAPHR VLPVVFDAGT NNEALLQDKY YLGVQRKRLK GAAYFRMMDE FMDAVRFRWP NVLVQFEDFS SEVAQTLLDR YRDDHLCFND DIQGTGATTL AGVLGALRAK GEEVTSLGDQ RIVIAGAGSA GIGIAQVLMQ AMEEQGRTPE EAKNAFYILD QNGLLGTDRA NDLNAEQRVF VRSADNNLSL MDVVKKYKPT ILLGVTTVGG LFTGDLIREM HSSCERPIIF PLSNPTNKAE CTAEQAYEWT NGQCIFASGS PFDTIEFEDG RVFYPSQCNN MYVFPGLGLG ASVCGAQKVT DRMLYVAAET LANFVSKKDM EEGRLFPQLT RIREVSHRIA VAVVEEALRE GLATKVKPAD ANDLDSFVGR KMYFPEYVPL VEKREISI
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