| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54087 |
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| Symbol | |
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| ID | 7197424 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 358153 |
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| End bp | 359982 |
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| Gene Length | 1830 bp |
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| Protein Length | 549 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177920 |
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| Protein GI | 219112337 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.027692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ACATCACAAC CATGAGCGCA ACGACTGTGA GCGCGGATGG AAGAAAGTAT TGCCCCCGTA
TCCATTTTGC CCGTTGCACA CTAGTATCAA AAACGAGATG ATTGTCTACG AACAGGACCT
ATTTGGTCTC AAAAATTTGA CCCGCGTGCA CGGATCAGCT GTTTACCGAG TAGTCTTACC
AGCTTCAGTC TCGTCCGCGA TCCTCCTGAT TTTTCACAGT TTACAAATCG ACAATGACCA
GACCCAAAAG GCACGAGAAG ATCTCATCGT GCAGCATCCT TACGTCATTG GGGCCTTTGT
TGGATTCTTT TCTTTTCTGT TGACCTTTCG ATTGAATTTT GCCTACCAGC GGTACTGGGA
AGGGGCTACC GCTATACACC AGATGTTGAG CAAATGGACA GATTTCGGTA TGAACGTGGC
GGCTTTTCAC TACCAGAGCG ATGTATATGA TGATATACAG CCACCGAGCT TTGGATCGCA
TCCAAATTTG CGAGCAAAAG ACATTGTGGG ACGTGAACGC GATTTCGAAA CAACGTACGA
GGAGTGCGTT GAGAAAGTAG AGCTCTGCTT GGAAGAAATG CAGCAAGAGA GTATCGCAAA
CACATCCCCG GCGTGGTGGA GAGGGGGATT ACGACGTCGC AGACACAAAG ACCACGCCGA
TTCGACTCGG CAACCGTCCA CAACAACACC CCACAGACTT AAATCGATCA ATGCCAACAA
AGAGACTAGC AGCAATTCCG CCCCCAACCG CCTAGATTCA TACATTCCCA TCCCCCAGCG
CTTCCAGGAA CAATTTGGAA TAAACTTGAG GAGACAGTCA ACGCCTATCA CCACGGATAG
TCGAGCCAAC AGCCGTCGTA GTAGTCTCGT CAAACAATCC AAAGCATCGC AAAATCTAGT
TTCTCGTAAG GCACGCGTTC CTTTACCCAG CCTGTTTTTA CAGGAAACTG CACATTTGCT
TTCGCTTTTG GCCGGTGTCG CTTTCTCGAC GCTCCGTAAC GATATGGAGC AGGCCGAGAA
TCCTTTAAAC ATGTACTATC CCGGAAAACC CTGGCCTGCG ATGGATCCGG ATTGTCTCGA
TAAAGATACC AAGCACCTAT ACGGCGAAGA TCAGATCCTA TGGCAATCCT TGTACTTTAT
GCTTGGTTTA GATCGAAGTG AGCGACACAG GACGCTGTAC AACGCCGCCA GACCGTTTGG
TGTCCTTGGT GGTGTCAGTG ATCAAGAAAT TGCCATGCTT CAGCAAGCAC ATGGGCCGTA
CGCCAAGGTA GCGCTGTGTA CAATGTGGAC GCAAGAATTT ATTAGCCGAG AATACATGGT
AGGGTCGGCC GGAAAGGTGG CACCGCCGAT TGTGTCGAGA TTGTACCAAT TTCTATCGGA
TGGTGTGGTG TAAGTCAACA CGGCGTCGTT TGATGGTCAG CAGAGCCAAG TTTCTCATCA
TTGTATGCCT TCGGTATTTT TGTCAAGGAC ACAGTGGCTA CAACCAGGCC CGGAAAGTTG
CCTATATCCC TTATCCTTTT GTAAATGCTC AAATGACAGC ATTTTTCAGC CTCAGTATCA
TATTCATTTT CCCCATGTTG ATGTATTCCT ACGTCAATGT TCTTTGGTTT GCTTGCGTAC
TAAATTTTAC TGTCGTGACC TGTTTTCTGG GTATGCATGA GGTTGCTCGG GAATTGGAGA
ATCCTATGCA AAACGCGCCG AATGATTTAC CCTTGGTCAC CTATCAGGCC CAGTTCAACG
AAGCGCTGGT AACCATGTAT GCTGGCTTTC ACCCGGATTC GTGGTGGGAG ATTCGCAGCC
AAGAGTCCAA GGATGATAAC ACGCAGTTCG
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| Protein sequence | MIVYEQDLFG LKNLTRVHGS AVYRVVLPAS VSSAILLIFH SLQIDNDQTQ KAREDLIVQH
PYVIGAFVGF FSFLLTFRLN FAYQRYWEGA TAIHQMLSKW TDFGMNVAAF HYQSDVYDDI
QPPSFGSHPN LRAKDIVGRE RDFETTYEEC VEKVELCLEE MQQESIANTS PAWWRGGLRR
RRHKDHADST RQPSTTTPHR LKSINANKET SSNSAPNRLD SYIPIPQRFQ EQFGINLRRQ
STPITTDSRA NSRRSSLVKQ SKASQNLVSR KARVPLPSLF LQETAHLLSL LAGVAFSTLR
NDMEQAENPL NMYYPGKPWP AMDPDCLDKD TKHLYGEDQI LWQSLYFMLG LDRSERHRTL
YNAARPFGVL GGVSDQEIAM LQQAHGPYAK VALCTMWTQE FISREYMVGS AGKVAPPIVS
RLYQFLSDGV VGYNQARKVA YIPYPFVNAQ MTAFFSLSII FIFPMLMYSY VNVLWFACVL
NFTVVTCFLG MHEVARELEN PMQNAPNDLP LVTYQAQFNE ALVTMYAGFH PDSWWEIRSQ
ESKDDNTQF
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