| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_51558 |
|---|
| Symbol | RPN7 |
|---|
| ID | 7197250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | + |
|---|
| Start bp | 1277573 |
|---|
| End bp | 1279052 |
|---|
| Gene Length | 1480 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | regulatory proteasome non-atpase subunit 7 |
|---|
| Protein accession | XP_002177792 |
|---|
| Protein GI | 219112081 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATT CAACTGCTCC AGCGAAACCT CCAGTCGCTC CGAAAAAGGA CAAGACTCTG
GGTCAGCCCT CGGCGTCGGA AGAAACGGCT TCTCTCTATC CCAAAATGGA TCTGTGTCAG
AAAATGCACC GCTTAACGGC GGCGAAGCAC GCTGGAACGC TCGACAGCCT GCTGGAATTG
CAAACCGAAG TGTTTACCGC CATTGCCGTG GATTTGGTGA ACCCGTCACT CTACCGGCGT
TTACAACTCG AACTCTACGG CGCTCCGACT CCGTCGAACG CCGCTGCTGC TCTGAAGCTG
ACAACCGACG ATCTAGATCA GCTGCAAGTC AAGCAGGAGA AAGAGTTGGC GACGCTCGAA
GCTGCCGTCA CAGACGCGCA GGAAAACGCC GGTGACATGG AAGTGGTGGA CGCCCGCGTC
AAGGTGGCGC GATTCGCCGC ACAGTCGCTG GCGGAAAATG TCGCCCTCGA CGCCTACGAA
AAACTCCTCG ACGTACCCAA ACTCTCTTCC GGAAAAAAGA TTGACGCACT CATGGAACAA
GCGCGCGTAG CGAGCTTTTA CAAGGATACG AGCCGGGCCG ACGATTGCAT AGCTCGAGCC
GATAAAATCG CCAACGAAGG GAGCGGCGGC GATTGGGATC GACGCAATCG TCTCAAAGTT
TACAAGGCTC TTCAGCGGTT GTTGCACCGG GATATGCAAG CCGCCGCCGA AGCTCTTTTG
AGCTGTATTG CCACCTTTTC CTGCAACGAA ATCTGCTCCT ACGGGGATTT CATTGTCTAC
ACCATGCTCA CGAATTTGTT GCATTTGAAA CGACCCGAAC TCAAGGTCAA GATCATTGAT
GGACCCGAAG TGCTGTCGGT CGCCAATCAT AATCCGGTTG TGGTACGTAC GTTGGCTTTT
GTTGGTGATG AATATGCTCT TGTAAAGACC ACACCACATA GCGAAAGGAC GATGAGTCAT
TGTTAACATA TCTCTATTGA TCTTAGCAAT GGACGGATTC GATTTCTCTG TCATTTCGAT
TCACAATTGA AAAACAATGC TCACCTCTAG CTATCTTCTT TATGATTTTT TAAAATACAG
ATCAAGCTCG TCAACGCCTA CTACGACTGC GACTACAAGA CTTATTTGAA TGCCATGGTG
GAAGTCGAAC AGGTCTTGCT CGACGACCGT TACCTACAAC CCCACGCAGC GTACTGGATG
CGTGAACTCC ACCTTCTCGC CTACCAGCAA TTCCTCGAAT CTTATCAATC GGTCCGATTG
GATGCCATGG CCAACGCCTT TGGCGTTTCG GTCGATTTCA TCGACACGTA CGCTTCTCGA
TTTATTGCCT CCAATCGACT CTCCGCAAAA ATTGACAAGT TCGGCGGGGT CATTGTCACC
AATCGACCCG ATCGGAAGAA TGCCCAATAC CGCGATATGA TACAAAAAGG TGATCTCCTG
TTGAATCGCA TTCAAAAGCT GGCCCGCGTG GTAGATTTGT
|
|---|
| Protein sequence | MADSTAPAKP PVAPKKDKTL GQPSASEETA SLYPKMDLCQ KMHRLTAAKH AGTLDSLLEL
QTEVFTAIAV DLVNPSLYRR LQLELYGAPT PSNAAAALKL TTDDLDQLQV KQEKELATLE
AAVTDAQENA GDMEVVDARV KVARFAAQSL AENVALDAYE KLLDVPKLSS GKKIDALMEQ
ARVASFYKDT SRADDCIARA DKIANEGSGG DWDRRNRLKV YKALQRLLHR DMQAAAEALL
SCIATFSCNE ICSYGDFIVY TMLTNLLHLK RPELKVKIID GPEVLSVANH NPVVIKLVNA
YYDCDYKTYL NAMVEVEQVL LDDRYLQPHA AYWMRELHLL AYQQFLESYQ SVRLDAMANA
FGVSVDFIDT YASRFIASNR LSAKIDKFGG VIVTNRPDRK NAQYRDMIQK GDLLLNRIQK
LARVVDL
|
|---|
| |