Gene PHATRDRAFT_50741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50741 
Symbol 
ID7197262 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp1343462 
End bp1344422 
Gene Length961 bp 
Protein Length173 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177809 
Protein GI219112115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAAACCGAA ATCGAACCAT CTTCCACCCA TGAGAGAAAA AGTTGCGTCC ATGCGCTTCG 
ACTTTCTGTG GTCGGGCCCT AATTCACAAA AGAACATCCG AAAAGAGCTA CATTGGCAAC
TTGCTGATCA AGCTATTGAT TGGTAACCTT GATATGCCAC CGCCGACAAC TTCTTTCGAA
GTATACGTTT CGAAGGATAC GTTCAAATTC AACGCCGCTC ATTTCGTGGC CTTTCAAGGA
TACCGTGAAC GACTCCACGG TCACAACTAC CGCATCGGTG TTCGTCTTTT GGGTCGTCGG
CAGATCGGCG CCGACGGATA TTTGATCGAT TTCGGTTGCG TCAAGGATGT TTGCAAAAAA
GTGTGCAAAC GCATCAACGA GCATTTTCTA TGTCCGGTAC ATTCCGATGT ATTGAAAATC
ACGACGGAGA ATGAATCAGT GCGCATCGAG TGTGCGGACG GCACCTATTT CGTATTTCCC
GCCGCTGACT GTGTCATGCT CCCCATATTC CACGCTACCG CTGAAGAACT CGCTATCTAT
TTGTACGCTG AAATACTGAA TGGATTGAAC GCCGATTACT TGCAAAAACG CGGAATCCAT
ACCATGGAGA TTGCCGTGGC CGAGGCCATC GGACAGGAAG CAACGTTTCG ACTTGAAATT
CCCGAAAATG TGCCGGATGA CTTTAAGTTG GATGTCAAAG CATTTATAAC TGAAGGGGAT
GTTGTTCCCA TGCCCTGTCC GGCTGAAACC TTATCAGCGA AAAGGAATTG TTGTCTTGAC
TGTCAAACGT CCAAGAACGA ACTATCCGCA CAATTGCAAA AGTTGGCTAA CGCCATCAAC
GAAGGTAAGC TTAGAGAAAT GGGCAATGTT ACGGGCGACG ATCTGCAAAG AATCTTTTCC
AAGTAGCAGC TTTACTATCA TAACATCTAG ACGAGGAGTT TGTAGACTAT ATTGGAGTTG
A
 
Protein sequence
MPPPTTSFEV YVSKDTFKFN AAHFVAFQGY RERLHGHNYR IGVRLLGRRQ IGADGYLIDF 
GCVKDVCKKV CKRINEHFLC PVHSDVLKIT TENESVRIEC ADGTYFVFPA ADCVMLPIFH
ATAEELAIYL YAEILNGLNA DYLQKRGIHT MEIAVAEAIG QEATRGVCRL YWS