| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50725 |
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| Symbol | Lhcr3 |
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| ID | 7197307 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 847714 |
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| End bp | 848728 |
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| Gene Length | 1015 bp |
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| Protein Length | 199 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | protein fucoxanthin chlorophyll a/c protein |
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| Protein accession | XP_002178019 |
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| Protein GI | 219112535 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.958322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGCAATCTT CACCATGATG CGATCTACCA TTCTTGCTGC CTTGTTGGCC AGTGCCGCGG
CCTTCGCCCC TGCTTCCATG GTATGTTTGT GTGAGAATGT CGGAGACGGA TAGGAGCCAA
TTTTTTGGAT TGGAAAGGTA GCCGGGCAAC AAATTTGTAG TTTTGGAAAG CGAGTGAGCA
ACGTTCGGAA TATTGCTTAG CTCAACCGGG GTATCTTTGG ATCGTGACCC GTGTATGTCT
GTAGTAGAAG CCTCTGATGT GTGCGATCTT TCTTATTTAT GATATAGCAG TCCCAGCGGG
CTGGATCTGT TTCCTTGAAC GCCGAGGAAA TGTCCAAGTC CATTCCTTTT TTGGTCAAGC
CCGACAAGCT GGATGGATCG ATGGCTGGCG ACATGGGATT CGACCCCATG CGACTGTAAG
TGCCCTCTAC CACGACAAGA AAACGAAGGC CAATCCTACC GACAGTGTCA CTTACCCTTT
CTCTTACGCA TCGTCTCTCG CAGCTCGGAC ATCCAGACCG ACTTGAAATA CGCTCGCTGG
AGCGAAATCA AGCACGGCCG CATCTGCATG CTCGCCATTG TCGGAATTTT GGTCCAACAA
GCTGGCATCC ATTTGCCGGG TGAACAGTTC ACCAATACGG ATATTTTCGG TGCCGTCGAC
TCGGTCGGAT TCGGCGCCAA CATGCAGATC TTTGCCGGAA TCGGTGCCGT GGAAATCGCC
ACCTTCAATA AGCACTACGG AGAGGGAGAG CCGGGTGATC TTGGCTTTGA CGGTGGTCAG
TTGAAAGGAG CGAGTGCCGA CAAGATTGCT CTTCGTAAGG AACAAGAAAT TGTCCACTGC
CGTCTTGCTA TGATTGCCTT CCTGGGTGCC ATGGGTCAGA CTCTTTTGTT CGGACAGGCT
CTTCCCTAGA TTGGGACTTG CTTGGCAGTC TTGGAAGATC GCTAGGAGCG AAGTCTATCT
CTTTAAGGGA AGTAATTACT TTGCCTACAT AACTATTCTT GCTTCAGCGG ATTCT
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| Protein sequence | MMRSTILAAL LASAAAFAPA SMQSQRAGSV SLNAEEMSKS IPFLVKPDKL DGSMAGDMGF
DPMRLSDIQT DLKYARWSEI KHGRICMLAI VGILVQQAGI HLPGEQFTNT DIFGAVDSVG
FGANMQIFAG IGAVEIATFN KHYGEGEPGD LGFDGGQLKG ASADKIALRK EQEIVHCRLA
MIAFLGAMGQ TLLFGQALP
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