Gene PHATRDRAFT_50723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50723 
Symbol 
ID7197302 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp828982 
End bp830423 
Gene Length1442 bp 
Protein Length403 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177697 
Protein GI219111891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.193814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TAAGAACGAT CAACATGAGG TTCTCTTCAA TTTACATCGC CTCAATGGCG GTCAGTGTCT 
CTGCTTTCAT GACTCCGTCG CCTACTTCGA GCACGAGGGC AAACACGGCA TTGTTTGGGG
CCCCGTGTTT TGACCCAGTC GATAAAACAC TGAAAGGTGT GGATGCCGAT AGCACTGGTT
TCGATCCAAT GGCTGGATCC AACCCTGCAG TAATTCGCAA CAACAACGAC GAAGTTTGGG
TTCCTCAGGT ATGCACACAT GCACCCTAGA GACTTTTCGA TTTACTATTT GCCTTTGCTC
AAGCCTCTCC TTCTTGCGGT TATCTCAGCG TGCTCGCCCC CGTCGGAACC GTAAATCTGC
TGCTATGCGT GGCATGGTTC GGGAATGCAT TGTCACCCCC AGCAACTTCA TTTATCCCTT
GTTCATTCAC GATGAAGAAA ACAACCAGGC AATTGCATCC ATGCCGGGGT GCGAGCGCCA
CTCCTTGGAT TCCATGCTGA AAGAAGTCGG AGAATCGTTT GAGCTTGGCG TCAAGACATT
CGTGCTTTTT CCGAAGGTGG ATGACGCCTT AAAAACGAAT TTAGGCGTGG AAGCATACAA
CCCCGATGGC ATCGTACATA GAGCAATTCG AATGATCAAA GAAAAATACC CTGAAAGTAT
TGTATGTACC GATGTCGCGT TGGATCCATA CTCTGATCAA GGCCACGACG GTGTCGTTGA
AAACGGAAAA ATCCTGAACG ATGTTACCAT TACACAGCTA TGTAAGCAGG CCGTGAGTCA
AGCCAGAGCA GGCGCCGATA TTGTTGCCCC AAGTGACATG ATGGTATGTT GTCTTCACTT
GCTTAAACAC TATTTTACAA ATAGAAGGCT GTCTCACATT CCGGTTTTTA TAGGATGGGC
GCGTCAAGGC AATTCGTGAT GCGCTTGATT CGGAAGGTTT CACCGATGTT TCTATTCTTT
CATACACGGC GAAATACGCT TCAGCCTACT ATGGACCTTT CCGTGATGCG TTGGACAGTC
ACCCGGGTTT CGGCGACAAA AAGACGTACC AGCAAGACCC TGCCAATGGT CGGGAGGCCT
TGGTTGAAGC CGCCCTGGAT GCGGCCGAAG GCGCCGATAT GCTCATGGTC AAACCAGGAA
TGCCGTATCT TGATGTCATT CGCCGACTTA AGGATAATTC CGATTTGCCG ATAGCTGCTT
ACCACGTTTC GGGGGAGTAT GCCATGATAA AGGCGGCTTG CGAGAGAGGG TGGTTGAATG
AGAAAGATGT TGTACTGGAA ACGCTGACAT GCTTCAAGCG TGCAGGCGCT GACATTATTT
TGACGTATTA TGCTAAGCAA GCCGCAAAAT GGATCCAAGA GGATGGACTT TACTAAACAA
AGAATTTACA GTCAGAAATA AAAGTAGAGA CATAAGTCGC TCGCTTTAAG CTATTGGATG
AC
 
Protein sequence
MRFSSIYIAS MAVSVSAFMT PSPTSSTRAN TALFGAPCFD PVDKTLKGVD ADSTGFDPMA 
GSNPAVIRNN NDEVWVPQRA RPRRNRKSAA MRGMVRECIV TPSNFIYPLF IHDEENNQAI
ASMPGCERHS LDSMLKEVGE SFELGVKTFV LFPKVDDALK TNLGVEAYNP DGIVHRAIRM
IKEKYPESIV CTDVALDPYS DQGHDGVVEN GKILNDVTIT QLCKQAVSQA RAGADIVAPS
DMMDGRVKAI RDALDSEGFT DVSILSYTAK YASAYYGPFR DALDSHPGFG DKKTYQQDPA
NGREALVEAA LDAAEGADML MVKPGMPYLD VIRRLKDNSD LPIAAYHVSG EYAMIKAACE
RGWLNEKDVV LETLTCFKRA GADIILTYYA KQAAKWIQED GLY