Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50723 |
Symbol | |
ID | 7197302 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 828982 |
End bp | 830423 |
Gene Length | 1442 bp |
Protein Length | 403 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177697 |
Protein GI | 219111891 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.193814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TAAGAACGAT CAACATGAGG TTCTCTTCAA TTTACATCGC CTCAATGGCG GTCAGTGTCT CTGCTTTCAT GACTCCGTCG CCTACTTCGA GCACGAGGGC AAACACGGCA TTGTTTGGGG CCCCGTGTTT TGACCCAGTC GATAAAACAC TGAAAGGTGT GGATGCCGAT AGCACTGGTT TCGATCCAAT GGCTGGATCC AACCCTGCAG TAATTCGCAA CAACAACGAC GAAGTTTGGG TTCCTCAGGT ATGCACACAT GCACCCTAGA GACTTTTCGA TTTACTATTT GCCTTTGCTC AAGCCTCTCC TTCTTGCGGT TATCTCAGCG TGCTCGCCCC CGTCGGAACC GTAAATCTGC TGCTATGCGT GGCATGGTTC GGGAATGCAT TGTCACCCCC AGCAACTTCA TTTATCCCTT GTTCATTCAC GATGAAGAAA ACAACCAGGC AATTGCATCC ATGCCGGGGT GCGAGCGCCA CTCCTTGGAT TCCATGCTGA AAGAAGTCGG AGAATCGTTT GAGCTTGGCG TCAAGACATT CGTGCTTTTT CCGAAGGTGG ATGACGCCTT AAAAACGAAT TTAGGCGTGG AAGCATACAA CCCCGATGGC ATCGTACATA GAGCAATTCG AATGATCAAA GAAAAATACC CTGAAAGTAT TGTATGTACC GATGTCGCGT TGGATCCATA CTCTGATCAA GGCCACGACG GTGTCGTTGA AAACGGAAAA ATCCTGAACG ATGTTACCAT TACACAGCTA TGTAAGCAGG CCGTGAGTCA AGCCAGAGCA GGCGCCGATA TTGTTGCCCC AAGTGACATG ATGGTATGTT GTCTTCACTT GCTTAAACAC TATTTTACAA ATAGAAGGCT GTCTCACATT CCGGTTTTTA TAGGATGGGC GCGTCAAGGC AATTCGTGAT GCGCTTGATT CGGAAGGTTT CACCGATGTT TCTATTCTTT CATACACGGC GAAATACGCT TCAGCCTACT ATGGACCTTT CCGTGATGCG TTGGACAGTC ACCCGGGTTT CGGCGACAAA AAGACGTACC AGCAAGACCC TGCCAATGGT CGGGAGGCCT TGGTTGAAGC CGCCCTGGAT GCGGCCGAAG GCGCCGATAT GCTCATGGTC AAACCAGGAA TGCCGTATCT TGATGTCATT CGCCGACTTA AGGATAATTC CGATTTGCCG ATAGCTGCTT ACCACGTTTC GGGGGAGTAT GCCATGATAA AGGCGGCTTG CGAGAGAGGG TGGTTGAATG AGAAAGATGT TGTACTGGAA ACGCTGACAT GCTTCAAGCG TGCAGGCGCT GACATTATTT TGACGTATTA TGCTAAGCAA GCCGCAAAAT GGATCCAAGA GGATGGACTT TACTAAACAA AGAATTTACA GTCAGAAATA AAAGTAGAGA CATAAGTCGC TCGCTTTAAG CTATTGGATG AC
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Protein sequence | MRFSSIYIAS MAVSVSAFMT PSPTSSTRAN TALFGAPCFD PVDKTLKGVD ADSTGFDPMA GSNPAVIRNN NDEVWVPQRA RPRRNRKSAA MRGMVRECIV TPSNFIYPLF IHDEENNQAI ASMPGCERHS LDSMLKEVGE SFELGVKTFV LFPKVDDALK TNLGVEAYNP DGIVHRAIRM IKEKYPESIV CTDVALDPYS DQGHDGVVEN GKILNDVTIT QLCKQAVSQA RAGADIVAPS DMMDGRVKAI RDALDSEGFT DVSILSYTAK YASAYYGPFR DALDSHPGFG DKKTYQQDPA NGREALVEAA LDAAEGADML MVKPGMPYLD VIRRLKDNSD LPIAAYHVSG EYAMIKAACE RGWLNEKDVV LETLTCFKRA GADIILTYYA KQAAKWIQED GLY
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