Gene PHATRDRAFT_43773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43773 
Symbol 
ID7197048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp1435216 
End bp1436498 
Gene Length1283 bp 
Protein Length398 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178142 
Protein GI219112781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.261907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACGCTTTTGC TTCAAAGGAG GCCGGGCTTA CTAGCCTTGT CTTTCTTCCC AAGAACACCG 
TTTTGGAGCG GAACTGTCTA TCGAAGATGG TGCGCGAGGC AGACGAAGAG GAGGCCATGC
TCCCAAACGG AGTTGCGGAT AGAAGGACGT CGTCTAGTCC TTCGATCTGT TTTCCTCCTT
GTGGCAGATC GAGTTTATTG ATTGGGAACG CCTTCGACCT TATCGTTGTG CAGAACGAGC
ATGAGTTTGC AGCGGGTGAC GCTATTTTCT GGTTTGGCGT CAAGTTTTTG AAAATTGGAG
CCTGTGACAG TGGGGGAAGT CGAATAGTCT TGGAGGTCGC GCAAGGGAAA AGGAGTGCGG
TCCGATTTCC CATTGTCCAT CAGAAAATTC AGGAACCGGA GCCACCATTG GAATATCATC
CGTCTGACGG CGCTATTGTT GCGAAGAACA GAAAGACTCG GCTTTCAACA AACGCTGCAC
GTACAGAGCA TGACCCTACA GCGCTTTCTC AGCTCGCTAA TCTCCTCGAA AGTGGCGTCA
ACTCGGCAAG ATACCTTTTA TTGGACGGCG ACGATTACGT GCTCGGTGTT GCGCCAGTTA
ACGTATTTCT TTGGTCAACT AGAGATAGGC TTCTGGTAGT AGATATTGAC GGAACCATTA
CAAGGTCAAA TCTGCGGGGG GTCATTGATA CGATACTGAC GGAGCAGTAT ACCTATTGCC
ATGATGGCGT ATGTCAGTTT CTCTCTTCGA TTGAAAACGT GCGGATGCTT TACCTTACAT
CGCGTCCTAT TGGAATCGCC AACACAACCA GAAAATTCCT GTCACAGCTT CGCCAGGCAC
AAAGTCATCA ACTTCCTGGT GGCCCTTTGC TGGGCTTCAC CGGCAGCATG GCCAAGGTTC
TTCTGATGGA GCTGGTATCG AAATCGGTCC ACGAATTTAA GCGGGAAGCT CTGACCACCA
ATGTAGTACG TCCATTCTTA CAGTTGGGCG TCCGTAATGT CTTCTTAGCC GGCTTTGGTA
ACAGTCTCAT GGATATGCAG GCATATCACG GAGCTGGAAT GCAAATGCAT CAGATCTACT
TGGTTGACAA ACGCTCGCGG ATTTATTGTC TCGACTGCAA AGCCAACCGA GAGCCTCTAC
GGAACCAGGA CTATATGCAC GCAAGAGGAA CACTGTTTGA AGGATATCAA GATAGCAAGC
TCATGGCTCA TATTCTCGGA CAAGCACTCA TAGAAACTTT CGATACCAAG CCAAAATTGG
CGGCTTCACT GAAGATTGTA TAG
 
Protein sequence
MVREADEEEA MLPNGVADRR TSSSPSICFP PCGRSSLLIG NAFDLIVVQN EHEFAAGDAI 
FWFGVKFLKI GACDSGGSRI VLEVAQGKRS AVRFPIVHQK IQEPEPPLEY HPSDGAIVAK
NRKTRLSTNA ARTEHDPTAL SQLANLLESG VNSARYLLLD GDDYVLGVAP VNVFLWSTRD
RLLVVDIDGT ITRSNLRGVI DTILTEQYTY CHDGVCQFLS SIENVRMLYL TSRPIGIANT
TRKFLSQLRQ AQSHQLPGGP LLGFTGSMAK VLLMELVSKS VHEFKREALT TNVVRPFLQL
GVRNVFLAGF GNSLMDMQAY HGAGMQMHQI YLVDKRSRIY CLDCKANREP LRNQDYMHAR
GTLFEGYQDS KLMAHILGQA LIETFDTKPK LAASLKIV