Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43773 |
Symbol | |
ID | 7197048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 1435216 |
End bp | 1436498 |
Gene Length | 1283 bp |
Protein Length | 398 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178142 |
Protein GI | 219112781 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.261907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACGCTTTTGC TTCAAAGGAG GCCGGGCTTA CTAGCCTTGT CTTTCTTCCC AAGAACACCG TTTTGGAGCG GAACTGTCTA TCGAAGATGG TGCGCGAGGC AGACGAAGAG GAGGCCATGC TCCCAAACGG AGTTGCGGAT AGAAGGACGT CGTCTAGTCC TTCGATCTGT TTTCCTCCTT GTGGCAGATC GAGTTTATTG ATTGGGAACG CCTTCGACCT TATCGTTGTG CAGAACGAGC ATGAGTTTGC AGCGGGTGAC GCTATTTTCT GGTTTGGCGT CAAGTTTTTG AAAATTGGAG CCTGTGACAG TGGGGGAAGT CGAATAGTCT TGGAGGTCGC GCAAGGGAAA AGGAGTGCGG TCCGATTTCC CATTGTCCAT CAGAAAATTC AGGAACCGGA GCCACCATTG GAATATCATC CGTCTGACGG CGCTATTGTT GCGAAGAACA GAAAGACTCG GCTTTCAACA AACGCTGCAC GTACAGAGCA TGACCCTACA GCGCTTTCTC AGCTCGCTAA TCTCCTCGAA AGTGGCGTCA ACTCGGCAAG ATACCTTTTA TTGGACGGCG ACGATTACGT GCTCGGTGTT GCGCCAGTTA ACGTATTTCT TTGGTCAACT AGAGATAGGC TTCTGGTAGT AGATATTGAC GGAACCATTA CAAGGTCAAA TCTGCGGGGG GTCATTGATA CGATACTGAC GGAGCAGTAT ACCTATTGCC ATGATGGCGT ATGTCAGTTT CTCTCTTCGA TTGAAAACGT GCGGATGCTT TACCTTACAT CGCGTCCTAT TGGAATCGCC AACACAACCA GAAAATTCCT GTCACAGCTT CGCCAGGCAC AAAGTCATCA ACTTCCTGGT GGCCCTTTGC TGGGCTTCAC CGGCAGCATG GCCAAGGTTC TTCTGATGGA GCTGGTATCG AAATCGGTCC ACGAATTTAA GCGGGAAGCT CTGACCACCA ATGTAGTACG TCCATTCTTA CAGTTGGGCG TCCGTAATGT CTTCTTAGCC GGCTTTGGTA ACAGTCTCAT GGATATGCAG GCATATCACG GAGCTGGAAT GCAAATGCAT CAGATCTACT TGGTTGACAA ACGCTCGCGG ATTTATTGTC TCGACTGCAA AGCCAACCGA GAGCCTCTAC GGAACCAGGA CTATATGCAC GCAAGAGGAA CACTGTTTGA AGGATATCAA GATAGCAAGC TCATGGCTCA TATTCTCGGA CAAGCACTCA TAGAAACTTT CGATACCAAG CCAAAATTGG CGGCTTCACT GAAGATTGTA TAG
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Protein sequence | MVREADEEEA MLPNGVADRR TSSSPSICFP PCGRSSLLIG NAFDLIVVQN EHEFAAGDAI FWFGVKFLKI GACDSGGSRI VLEVAQGKRS AVRFPIVHQK IQEPEPPLEY HPSDGAIVAK NRKTRLSTNA ARTEHDPTAL SQLANLLESG VNSARYLLLD GDDYVLGVAP VNVFLWSTRD RLLVVDIDGT ITRSNLRGVI DTILTEQYTY CHDGVCQFLS SIENVRMLYL TSRPIGIANT TRKFLSQLRQ AQSHQLPGGP LLGFTGSMAK VLLMELVSKS VHEFKREALT TNVVRPFLQL GVRNVFLAGF GNSLMDMQAY HGAGMQMHQI YLVDKRSRIY CLDCKANREP LRNQDYMHAR GTLFEGYQDS KLMAHILGQA LIETFDTKPK LAASLKIV
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