| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43752 |
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| Symbol | |
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| ID | 7197269 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 1377013 |
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| End bp | 1384818 |
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| Gene Length | 7806 bp |
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| Protein Length | 2360 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178129 |
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| Protein GI | 219112755 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.316401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAGGC CACGCCGGAA CTTCAGCTTT TCGTTCGTCG GTCCCAAGAC GCTGGACGAT
GTAATCAAAA AGGAGCTGGT GACAGAGAAA TCGGGTGCCG AAGTCGCCGA TATTTGGTAT
TCCTATCACG AAAATAAGGT AAGCCGGATT TTGTAGGAAA ACTTTGCTTC AACGATTCTA
ATTTCTGACG AGGTTTTTTC TTCTCCCTTA AAAGGAAAAC GTTATTGGTC TTGTCCTGGA
TAGCCAAGCA GGAAAGTCGG TTTTGTCGAG AGCGCAGAAA TGGTAAGACT GTCAGATTCA
TCAGGTGTTG ACTTTTTGCT GTATGGCGGC TATCGTTGGT GGCGTCTCAC TTCTGATCGA
TACGCACCGA TAGTCCATTC TTCGTGCAGC CTGTATTCCG AGACGACGGT AAGATACAAG
CCGCTGTTCT AAACTGATTT TTTGTCCTTG ATGATTCTGA AGACATCTCT GTTTCCTCCG
CCGCCCGACA GGATTTTTTA TGATGGTATC CCAGTTTCAG AGTCCGGGCC ACTTTCTCAT
GGCCTATTTA GAGGACTACA AAATGGATCC GCAGAGTGCA ACCCCGTTGT TAACGTTTTC
GGTGTTTGAC GATTTGGCAG ACAACAAAGA CGTGGTACTA GTCCGCGCCG ATATTCTCAA
TAAGAGTATA CAAGATGACG AAGGTCGGAA AGTGGTCCGT AGCGTTTTAG ACAATTACCG
GGACGAAGAG CACTTTGTTG TCGTCAAGAC CTTCAACGAA CGACCCGACG CGTTTGATAT
CGACGACTAT ATCTCCCGAA TGAATATTCG TTGGCAACAG GATCCTCCGA ATACGGTTTC
ATCCTAAAAG GTAGGCGCGG TGGTCGGAGG ATCCCAGTGG TGCGGCTGGA TCGTCAAACA
TGAACGATAA GGAAGCTCGG GTTGTCTTTT TTTTCTTAAA AAGAGAAGAG CGAATATGCT
TGCAAATTGA AATAGTCTGT AAGGTTGGTT TACTGTTTTT AGCATAGCGA AGTTCTGTTC
GTTTCTACCG AAACGTAGGC GGGGCTGGCA GTGAAGTGGA CGCGACCCGC GAACGATGGC
AGATAGCCTA GCCTCTCTAG AGTCCTGCCC GAGTGTCGTA GGTATGAAGA AGGGTCTGTG
GTGGATTTTC ATTGGTCTGC TCGTATCTTG GTAGACATTC CCTAAAATAA CGGGCCAAAA
GCCTCCACAG CGTGGACCCG ACACGACGCT CCTTCTCGAA CCCAACAAAT AGCATCCCCA
CGACAATCGA CAAACAGCGC GACTCCTTCG CGGACAACTA CAACTCCCGT CCTTCCTGTG
GACTGTTCTG AAGGTGCTGA CGTCTCTGCG GAAACTAGTT TGGAAGAGTT CTGTATCGTG
ATGGAAGACT TTTTGAAGTT TCAGTCATGG GGGGAACCGT TGATCGGTTC CGCCGATGCC
GGTCTGGGGC AACCCATTCG ACCGACGAAG AATGGATTGC AGTGGCTCGC GGTTCCGTCC
ATGTGCGTCA ACACGGCCTA CCGTGTAACC AGAGGGTCAC TCCAGCGGCT ATCTGTGACC
GATGCCGCAA GTATTACCGT AGATGCACAA ATATCGTTAC CGACGGGAGC CATCCGAATT
GCAACTTCGC CAGATGGACG TTTGGTTGCC GTGGCCTTGA TGGACGGTTC ATTGGCGTTC
TACGACTCAA CCAAGAAGGC GTTGAATTTG AGACGGCACC TCTCAGATGT GCACTCACAT
TTCGTGTCCA GTACTGACGA GGTGCCCTCG TTGTCTCGAG ACAGTGCGGC GGGAGCGTCC
GGCCCCGTGC GCTCTCTCGC GTTCGGTTCG GACCCGAACG TCGACGGATA TGCACTCTTG
CTCGTGGACG ACAGTCAACA AGGGTGTATC ATTTACCATA TAGACGATGA ATCCAAGCCG
ACCGACATGG TGCCACACCA ACTCGATCGT GGGGGTTTCT CCAGTGCCTG TTGGCGGTCC
GGTGGGGCGG CTTCGGCATC GCCGAGTGGC ATGGGAGCGC TCGCGCTCGG TACGACCGAC
GGAGTCGTGC ACGTCTACTC GTATACGAAT GACGGTAATA CAACGCCATC GTCGTCATTG
TCATCCCAGC TGATCCATCG GGGTATTATT TCCTTCCCAG GTGATGGGGA TGGATGGAGT
TGCACGCACC TGGATTGGTA CGACGACGCG CTGGTGGCTG GATACGGTCG CGTTATTCCC
GACGAAGGCG ACGTCACGGA CGTAGAAAAT GAAGACGATG CCGCCGATCA CGAAGCCCTC
TTGTTCGTTT TTGTCCTTGA CGACTCTTTT CACGTTTCGA CTACATCGGA CCTCGGGGAT
GTAGTCCCGT TCTTTTCCGT TCCGAAACAA GGGCGCCACG TGTTCTTGAC CACCTTTGCT
CCATCGGCTA CCCACGCACC TTTACTGCTG GTAGCGAGCA ATGTAGCAAC AGATGTGGGA
GTTGTCAGGC GGACGGAAGA AAATACTTGG GATTTGACCG ATGTCCCCGA AGGGGATAAT
GTCATGACAC CGACGAATGA CGACGATGAG TTTACGTATC CTATTGGCCT TTGCGTAATT
CGTGTGGCAC AGGAAAGTCA GACCGTCCCA ATTGTGCTGC TAGCTGCCAC AGATGGGTCC
ATCGGTTGTT GGGAACTCCT ACACCAAAGC CAAGATGACT TTTTTCGACT TGAGCCGCAA
CTACCATCCA TACTCCCTGA CGACGCTGTG CCGCCGAAAG TTCAGAGATC GACGACTACG
TCACCATCTA CCATTGTTGG TGGCAGCAAA ACGTCATTAT TTACCGAGGA AAACCCATTA
TCATCCGCAA ATTTGACTCA GATGCCCATG GCGACAGGTG GCAAGGATGA TAGATTCTCT
TTCGGAGCGG TGAATGATTC AGGGGGAGCT TCTTTTTTTG TAGATGGTAT TACCAATCCA
GAAGTTGGTA GCCGACTTCC ACCTACTAGA AACTTGTCTG GCGCTGTATC TGAGCAGAAG
GAGGTAACTA AGATTAGCAC GTCCGTTGAA AGGCCACCGG CGCTGGGTGA GACAACTCCT
CATGTCATGG TACAAAGCGA TTACCAGCAA CCTGCCGATA CGTTTAAAAG AACAGCTTCC
AGTCCTGTAG ACTCGCCCGG ATTTGGCGGA GTGACAACAC TCAAAACATC GGATGGGAAA
ATGACAGCTG TGGATGGTGA AGCCATAGTT TTTGGCTCCG GATCGGCTCC TGCTTTTGGT
TCAGGGTCGT CCTTTTCGTT TGGAACTTTG GCTCACAGTT CGAGTTCTGC TGCCTTTAGT
TCCAGCCCAA TGAACAATAG TCAGTCTGCT TTTGAGAACA TTTTTGGGCC CAAGCCTACT
TTTTCTTCCA CGGCAACAAA TATGGCCAAA CCGCTTTTCG GTTTAACCAA AAGTATGGAA
GGGAAGAAGA CAGAAGAGCC AGAGTCACCT GCTTTGATTG CAAAGCCTTC AGAAGATGAT
GAGGAACTAG GTATCCAAGG CCCTTTGGCC CAGAAAGCTG GTCACGTGTT TGACGAGATT
GACGACGGCC GAAAAGGCTA CGTTGCTGCT TCAAATATAG AAGACCTTCT GGATCGGCTC
GGCGAAGGGT TTCATGGGAG CGAACTAGAC TTGCAGGTGT CCCTGATCGA CCCTAGCGGT
ACCGGTCAAT TACAGCGCTC GGCGTTCGTT CAATGGTACG TCAACCACGT CGATGGTGGA
ATTCGGGACG TCAGTGACTC ACGTTCACTC GACTCGGATG ACCGGGCGGA GCGAGAAGAG
GAGCGCGAAC ATACGCGCAA GCGCTTTATG GACATGGCCG TCGAGGACCA GTTCGGATAC
GCAGTGGACG CTTCCGATTT TGGGAAGCTA ATGGAGTCCA TGGGCACGAC ATACTGCGAA
GAGGAGCACG TCGAGACAAT CAAGAAGCTC CAGAAGAAGC CTAGGAACAT GATTTATCTG
GACGATTTCT GCGACTGGTA CGTTGCTTGG CTATTCAATG GTGACGAAGA TTCTGTCAGC
GAGAAGGACG ACCAGGATAT AGCTAAGGGA AAAGAGGATA AGGGCCTCTC CCCCTACGGC
ACTGCTGGAG GGTGGGGTGA TACGTTTAAG AAGCAGGGTG ATAGCGGAGG TTGGAAGTGC
GACGTGTGTA TGGTACACAA CGAGTCGTCC TTGACGAAGT GCGCTGCTTG CGAGACGCCA
CGCCCCGGTC ACAGGGATAC AGAATCCCTC GCGATTCCCG AATCCAAATG TAGTGGTTCA
ATCGGTCCGA GTGGGTTCAC TTTTGGGGTT CCAGCTGCCA GTGCTATAAG TAAAACAGAA
GGGTCAGGCT TCATCTTTGG TGAAGCTCCG TTGCCACCAT TGGCCGCCCC GGCCAGAAGT
GACATGGCTG GATCCGCAGC AAGCGCAAGC AGTGGTTTCA CATTCGTTTC TCTCCACATT
ACAGACCAAA CGTTGTCTCG GGTCCAGCGG TCAACCTCTT CTTCGACCTC GAATTCTGTT
TCCCCCCTGT CATCAACGAC GCCTCAGAAG CCCTTCTCCG CAGCCCTGAA GACCAGCAGT
GCTTTCCCAT CGATGTCCAG TAGCGCCCCT ACTCCGGCGT CAGCATCAGT AAATGCATCG
TCGTCAGCAG CGTTTCCTCC AATGTCGTCG ACGGCTCCGA CGCCCTTCTC CGCACCCTCG
AAGACCAGCA GTGCTTTCCC ATCGATGTCC AGTAGCGCCC CTACTCCGGC GTCAGCATCA
GTAAATGCAT CGTCGTCAGC AGCGTTTCCT CCAATGTCGT CGACGGCTCC GACGCCCTTC
TCCGCAACCC TGAAGACCAG CAGTGCTATC CCACCGATGT CCAGTGGCGC CCCTACTCCG
GCGTCAGCAT CAGTAAAGGC ATCGTCGTCA GCAGCGTTTC CTCCAATGTC GTCGACGGCT
CCGACGCCCT TCTCCGCACC CACAAAGACG GCCACTTCAT CGGCTCCCGG AATTTTCTTC
CCATCCACAA CATATGTATC TCCGTCGTCT TCAATTCAGC CTCAATCAAG AATAGTTGCT
GCCAATCCGT TGCTCCGGGG AAACGGCGCA GAGACTCTAG ACTTATCCGA CTGTTCTAGG
CAGTTTCTGG ATATCGCTCA GAAGATGAAT ATAAACCTGG TGGACCTGTC GTCCCACTTA
CCGTCAATGG CTCGGCATTC CGTTGAAATT TCTATTTCAG ACGTAGTAGC TGATCTCCGG
GATTGCATGG TGGCGCTTTT TGACATACAG TTTTCGTTGT CTCACATCAA GGACAAAAGT
GCAACCTCTC TTTACATGCG AGCCCATACA ACACGTTTGT TTTCCGAAAG TAGGCAGACC
ATAGACATGC TGTCTTCACA GAATACGGAT TCTTTTGTTC TGAACCAACC ACTTGATAGC
GAATCAGAGA AACGACGGCG CGAGATGGCA TCAACTGCTT ACAAGTTCCA TGGCTACTTG
GAAAGACTTG AAAAACAAAC AGCACTATTG GAGGATTTTC GCGGTCCGAA CGGACCTGGA
AGGTTAATTC ACCAGCTTAC ATCCCTTCTG AATGATACGA AAGCCTTCAG AGATGAAGTT
GTTCGAATGG GAGGACGAGT TGAAGAGATT TGGAAAGTCG GAAGAAGTAG AAAATTGCGC
AGTAGGGGTG TTTCCCCGGC GCGAGCCAGC GTTCAAGCCC GAACGAAGAC ATCTTCCAGT
TGTGCTTCCG TTCTCGATCT TTGCATAAGT GTCGACAAAT CGTTCCAGCG TTTAACTACC
CCGTCTATCA CGGTATTTAA GTTGATGCAA CCTTGCGAGC CTGCGCCTGT TGAGAAGGCA
ACCTTTCGTA GACAGTGGAA TAGTAAATAC GCGATAGCTC AGTCAATACC GTTGAGCATT
GGGATGACAG ACATTGAACG TCGACGTCCC GCAAACGAAT CTCTTTTATT TTCGCAACAA
GCGCGATATG TACACCGTCG TGCATGGGAC GGATCGTCAG TTGATACATC TCAAGCACAG
AAGCTCTCGT TCTCTCCACC GAAGGAACTG ACTATGAGAA ATACGGTGGA TGCTGCCCAG
AACTCTCTCG CTAAATTTGG CACAACTAGG ACAGCTGTAA ATGGAGCCCT CAGCATTGCA
GAGCGCGGCG TTGGAAAGCC AATAGCTACT CAGTCCGTGA ACACCCCCCA CGAGATCGCA
TCTATAAAGC CAGAAGCAGT TCTTTCCGCT GTTTCAGCAG CTCTCCCTCC GCTTTCAACA
AAAGCACCAA CAGCATTCTC AGCTCAGGCA TCCCCGGATT CTACGGAAAA TCAAATGGCA
CCTCAGACTC GATCTTTCGA TTCTTCCAAC CGAAATGATC AAGGAGGGGC AGTCCCAAGA
ATGGATCTGG ACAAAGCATC CAGTTTGCCC GACTCGCTGG TGAAGACAGA CAATTCGAAG
TCAAGGGATA GTCCGGCTAT CTCTAGGAGT TACAGAGAAT TGTTGGAAGA CTTTTATGTG
AAGTATTGCC CGACAAAGCT CGGTGACATC GAGAAGCTCT TGGAAAAATA CAAGGTGAAT
CTACGGGAAA AGATCTTTTG ACAAACCACT GCTTCCGATG TTGTCTCAAT TTCTCACTAT
TTAATTGTAT CTGATGTTGC AGGGCCGCGA AGCTGAAATG TTTGCCAAGC TATCTAAGAA
GTATAATGTA GCAAATCCGT TAGGTTCGAC AGATCCACCT ATAAGCGGCT CCTTCGGAGC
AGCCGACAGG TCTTCCAAAA ACCCTTTCAC CCAGTCTGCT GCTCAAAAGG GCCCATCTCT
GTCCTCTGTC CAGAGGACAT CTGATGCTTC GAGCCTGTCC CCCTTCAGAG CTAGTGTACC
TGGAGTTTCA TCTCACCTTG GAGCAACAGG AAGCTCGCAA GATATTCTCA GTGCATCGTC
CGGAGCTTTT GGAACATCGC ACCCAAGTCC TGCAGGTTTT TCAATGACTT CGAACGCCAA
CCACACGGTG TCTTCTGCAT TCGGATCTTC ATCGACCGCT ACAGCGATGC ACTCTGAATT
GGGTCCTGTG ATGGATACTA CAAAGTCACC ATTTGATTCA GCTGGGACGC CTGCATTCGG
ACAGCTGATA TCCTCTCCTT CCACGACTCC ATTTGGCATG TCAGCGCAGT CATCTTCTGC
AATCTCTTTA AAGAGCGGTC AATTGTTTAC CGGCGGAAAT CCACGTGAAA CACTGCTAGC
CTTCTACAAT CAGCACAACC CTTCGAAAGT CGCTGAGGTA GACCGTTTAC TGGCGAAATA
TCAGGGCAAG GAAGATCAAA TGTTTCGCAA TCTGGCAAAA AAATACAATC TTGATCCCTC
TACGTTTGGT ATTTCGTCTG GACCATCGGC GGCTTTAGCT TTCGGTAGCC CCACAATAGG
AGCTCCAACC AACTTTGGAC AGCCATCTGC GCTTGGTGGT GGGTCGCCTT TTGGTGCACC
AGTTCCGGCA CCTGGCCGGT TTGGAGGAGC CATTTCTGGA GGTGGCTTTT CACAGTTTTC
ATCACCAAGC TCAGCGCCCT CGCCGTCTGG GCTTAGCTCC TCGGGTGCCT TTGGATCTGC
GAGTTTTGGT GCGCTAGCCC AATCTCCGGC GCCTTCTGGC TTTGGTGCGT TTGGGTCGGC
ATCACTCGCG TCACCCTTCG GGTCAACAAC ACCCTTTGGT GCCGCACGTC GATAGAGGAA
AGCTGCGTAA GAGTGTAAAG CTAGGAGTGG TAGACGTTGA TTATGTTAGT ATTCAGAACG
CTGTTAAAGT GGAAGGATTC ACTGGTGTAA GCTCTTTGCA ATTAAAAAAC ACGACATCAC
AGATCC
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| Protein sequence | MSRPRRNFSF SFVGPKTLDD VIKKELVTEK SGAEVADIWY SYHENKPSRK VGFVESAEMV
RLSDSSGVDF LLYGGYRWWR LTSDRYAPIV HSSCSLYSET TFQSPGHFLM AYLEDYKMDP
QSATPLLTFS VFDDLADNKD VVLVRADILN KSIQDDEGRK VVRSVLDNYR DEEHFVVVKT
FNERPDAFDI DDYISRMNIR WQQDPPNTAR WSEDPSGAAG SSNMNDKEAR VVFFFLKREE
RICLQIEIVS SPRQSTNSAT PSRTTTTPVL PVDCSEGADV SAETSLEEFC IVMEDFLKFQ
SWGEPLIGSA DAGLGQPIRP TKNGLQWLAV PSMCVNTAYR VTRGSLQRLS VTDAASITVD
AQISLPTGAI RIATSPDGRL VAVALMDGSL AFYDSTKKAL NLRRHLSDVH SHFVSSTDEV
PSLSRDSAAG ASGPVRSLAF GSDPNVDGYA LLLVDDSQQG CIIYHIDDES KPTDMVPHQL
DRGGFSSACW RSGGAASASP SGMGALALGT TDGVVHVYSY TNDGNTTPSS SLSSQLIHRG
IISFPGDGDG WSCTHLDWYD DALVAGYGRV IPDEGDVTDV ENEDDAADHE ALLFVFVLDD
SFHVSTTSDL GDVVPFFSVP KQGRHVFLTT FAPSATHAPL LLVASNVATD VGVVRRTEEN
TWDLTDVPEG DNVMTPTNDD DEFTYPIGLC VIRVAQESQT VPIVLLAATD GSIGCWELLH
QSQDDFFRLE PQLPSILPDD AVPPKVQRST TTSPSTIVGG SKTSLFTEEN PLSSANLTQM
PMATGGKDDR FSFGAVNDSG GASFFVDGIT NPEVGSRLPP TRNLSGAVSE QKEVTKISTS
VERPPALGET TPHVMVQSDY QQPADTFKRT ASSPVDSPGF GGVTTLKTSD GKMTAVDGEA
IVFGSGSAPA FGSGSSFSFG TLAHSSSSAA FSSSPMNNSQ SAFENIFGPK PTFSSTATNM
AKPLFGLTKS MEGKKTEEPE SPALIAKPSE DDEELGIQGP LAQKAGHVFD EIDDGRKGYV
AASNIEDLLD RLGEGFHGSE LDLQVSLIDP SGTGQLQRSA FVQWYVNHVD GGIRDVSDSR
SLDSDDRAER EEEREHTRKR FMDMAVEDQF GYAVDASDFG KLMESMGTTY CEEEHVETIK
KLQKKPRNMI YLDDFCDWYV AWLFNGDEDS VSEKDDQDIA KGKEDKGLSP YGTAGGWGDT
FKKQGDSGGW KCDVCMVHNE SSLTKCAACE TPRPGHRDTE SLAIPESKCS GSIGPSGFTF
GVPAASAISK TEGSGFIFGE APLPPLAAPA RSDMAGSAAS ASSGFTFVSL HITDQTLSRV
QRSTSSSTSN SVSPLSSTTP QKPFSAALKT SSAFPSMSSS APTPASASVN ASSSAAFPPM
SSTAPTPFSA PSKTSSAFPS MSSSAPTPAS ASVNASSSAA FPPMSSTAPT PFSATLKTSS
AIPPMSSGAP TPASASVKAS SSAAFPPMSS TAPTPFSAPT KTATSSAPGI FFPSTTYVSP
SSSIQPQSRI VAANPLLRGN GAETLDLSDC SRQFLDIAQK MNINLVDLSS HLPSMARHSV
EISISDVVAD LRDCMVALFD IQFSLSHIKD KSATSLYMRA HTTRLFSESR QTIDMLSSQN
TDSFVLNQPL DSESEKRRRE MASTAYKFHG YLERLEKQTA LLEDFRGPNG PGRLIHQLTS
LLNDTKAFRD EVVRMGGRVE EIWKVGRSRK LRSRGVSPAR ASVQARTKTS SSCASVLDLC
ISVDKSFQRL TTPSITVFKL MQPCEPAPVE KATFRRQWNS KYAIAQSIPL SIGMTDIERR
RPANESLLFS QQARYVHRRA WDGSSVDTSQ AQKLSFSPPK ELTMRNTVDA AQNSLAKFGT
TRTAVNGALS IAERGVGKPI ATQSVNTPHE IASIKPEAVL SAVSAALPPL STKAPTAFSA
QASPDSTENQ MAPQTRSFDS SNRNDQGGAV PRMDLDKASS LPDSLVKTDN SKSRDSPAIS
RSYRELLEDF YVKYCPTKLG DIEKLLEKYK GREAEMFAKL SKKYNVANPL GSTDPPISGS
FGAADRSSKN PFTQSAAQKG PSLSSVQRTS DASSLSPFRA SVPGVSSHLG ATGSSQDILS
ASSGAFGTSH PSPAGFSMTS NANHTVSSAF GSSSTATAMH SELGPVMDTT KSPFDSAGTP
AFGQLISSPS TTPFGMSAQS SSAISLKSGQ LFTGGNPRET LLAFYNQHNP SKVAEVDRLL
AKYQGKEDQM FRNLAKKYNL DPSTFGISSG PSAALAFGSP TIGAPTNFGQ PSALGGGSPF
GAPVPAPGRF GGAISGGGFS QFSSPSSAPS PSGLSSSGAF GSASFGALAQ SPAPSGFGAF
GSASLASPFG STTPFGAARR
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