| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43728 |
|---|
| Symbol | |
|---|
| ID | 7197018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 1301603 |
|---|
| End bp | 1302773 |
|---|
| Gene Length | 1171 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase |
|---|
| Protein accession | XP_002178115 |
|---|
| Protein GI | 219112727 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACGA GCGATGCTGG AATAGGAACA TGCGAAGCTT CGCACGGATC GATGCCGCCG
TTGACAATCT TAGCAATGAT CTTCGCCTTT CCCACCGTCT TTTGGTTTGT GGCGTATCTC
ATTCCTCAAT TGTATATGGT AGTGCGCCCT GTTCCTGATT TAAAGAAAAG ATACAATGCT
GAATGGGCTC TGGTGACGGG AGGTGGAAGT GGAATTGGCA AAGCGCTCGC ATTCAAGCTC
GCAAGTCAGG GCTTGAACAT TGTTATTGTC TCTCTCGACG ACAATTTCCT TAAGTCGACA
ATGAGAGAAC TCGCCGAAAT GTACCCGAAG CAGTCGTTTC GCGCAGCCGG TGTAACTTTC
TCGCCTGGCG TCGACTACAT GGCCAAGATC AACGCAGCAA CCAAGGACAT TGACGTTCCA
ATCGTTTTTA ACAATGCTGG GTTCATGGTT ACCGGATTTC TCGATCAAAC TCCGATTGGA
AAGCTCCTGG CAAACATTGA ATGCAATGCT ACAGCTTCAG TGAATATTTC GCATTTCTTT
GTGCAGAAGC TTGTCGCAAA AAAAGCAAAA GGTTGCATTG TTTTTACAAG TAGTGTTGCT
GGTTTTATAC CGACTCCATT TGCAGCAATG TATGCAAGTA CCAAAGCCTT TGTCTCGCAG
TTTGCTGCGT GCTTACATAT CGAAGTGCAG TCTCTTGGTA TTGATGTATG TGCAATCCAT
CCGTCTCCTG TCAAGAGCCA GTTTTACACG AACTTGGACC ACAAAGTCGA TATGATTGAG
AAGGCGGCAA CCAGTGCAGT GTCACCAGAC GAGAAATTAG CAGACACGAT GCTAAAGAGT
ATTGGTGTAT GCGCGTTGCG TGACATGGGA GGTCGGTACC AGTGCTTTGC CAGTCATAGT
ATTGGATGTT CAACAACTGA CATTCTTCTC ACCACTTTGC AGGATTGGCG TGGGGAACGC
GGATGGGCAC CTTTTTCTTG CCGTACAACT TTTTTGCCGT AGCCTTTGCA AATGCTGCAC
CGTTTATGCC CGACTGGAAG ACTCACAACA AGCATCGTTA AAAAGTATTA CTACATATCC
TCTACTTGTA ATTGCCGGAC GGACTTGTCC AACAGCTGCC TCCAACTAGA TAATGTTTGT
TTCTATTTGC AAGACAGAAC CACACGCCTT C
|
|---|
| Protein sequence | MSTSDAGIGT CEASHGSMPP LTILAMIFAF PTVFWFVAYL IPQLYMVVRP VPDLKKRYNA
EWALVTGGGS GIGKALAFKL ASQGLNIVIV SLDDNFLKST MRELAEMYPK QSFRAAGVTF
SPGVDYMAKI NAATKDIDVP IVFNNAGFMV TGFLDQTPIG KLLANIECNA TASVNISHFF
VQKLVAKKAK GCIVFTSSVA GFIPTPFAAM YASTKAFVSQ FAACLHIEVQ SLGIDVCAIH
PSPVKSQFYT NLDHKVDMIE KAATSAVSPD EKLADTMLKS IGVCALRDMG GLAWGTRMGT
FFLPYNFFAV AFANAAPFMP DWKTHNKHR
|
|---|
| |