| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43699 |
|---|
| Symbol | |
|---|
| ID | 7197000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 1224664 |
|---|
| End bp | 1226021 |
|---|
| Gene Length | 1358 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178099 |
|---|
| Protein GI | 219112695 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTCTCCCACC CGACACACAT TGCATACTCA CCACACACAC CTACCGGCAC ATACCATATC
GCCACCACGC CCGGGTGTGG CAAGGGGTGG TTCCAAGGCA TATTGCGTGA AGGAGTGATC
CCCAAACGGA ATCATCATGA TGGATCATTT CCTTTCGATT CTACCCAAGG GATTCTTCGG
GCGGCATCAC TCGCGGACGG CGATCCCCGC GACCCCGTCG CCGCCGCCAG CGGCGGCAAT
CCGCGTGGCG ACTCCAGCGC CGTCCCGCCG CATTCGGGAG GAACCGCGGA CGAAACGAGC
CCGCGAGACG TTGTGTCGGA CACCAGCGTT GGTATCGACG TCGCTGGAAG AAGGGGAACC
CTTCCACGAA CGTCCCGTCA AACGCTTTCG GGTCTCACCT TGCGTGGCCT GGCAATACAC
GCATCCGGTG CCGGAGCCGC TGGCCCGGCC GCGACCGACG CCCGTTTCGT GGGTCTCCCT
CTTACCGGAA GAAGTCACGG CGCACTGTCT CTCCTTTCTA CCCACGGTGG AAGATCGATT
CGCCTTGCAG TGCACCAATC GACAATTCCG ACGCATTTCC AACGAGAAAC CCATGATGCA
GCACGTGGCC GTCGCGGGTG ATCGCGAAAC CGGGATGCGC GGTATTCTGC AGGAACACGA
TACTCCGGAA ACGGCGGCCG TGGCCCTGAC TCCTTTTTGT CAAGCGGGAA ATCTCGAAGC
GATCTACATG TACGTGGTAA TTGTTTCGTG GTGTCAATGT TTGTGTGTGT GCGTGTGCGT
CGGATCCACT CGGCTCACTC GCGTGTCTTA TTCGTATTCC GTACAGGCTG GGTATTATCA
AGAGCTACTG TCACCAAGAC GTACAGGACG GTATTGCCTT GCTCAAACGA GCATCGCGCG
CAGGATACGT CCGGGCCACC TACGCGCTAG GTCTCGTGCT ACGCGATAAC GATCCCAAGG
AAGCCTCCCG GTACATGAGA AAAGCCGCGC ACAAAGGTTA CCTTCCCGCA CTGCAGGAAT
GGCTGCCCGC TCGCGAAATG AAACGCCGCT ACGGAGAACC CCTCGCCGAA AATCTACGCG
AATACCTCGA TCCCTTTGGT TTGAATCGAC TCTTGGCGCG ACACTACGTA CGGGACAAGC
CCCTTCGCAA TTTGAATACC TCGCACTGCT GGAATCCGCT CTGCGGACGC TGGGCGTTCA
AGGCACACAC CGCGCACGTC GTCGAGGAAC CCGTGGATGT GCGCGTTTCT CGCATGAAAA
TGTGCAGCCG CTGCTGCCGT GCCAAGTACT GCAGCAAACT CTGTCAAGTC TACGATTGGC
GCTCGGGACG ACACAAGACG GAATGCCAGT TTTTGTAA
|
|---|
| Protein sequence | MMDHFLSILP KGFFGRHHSR TAIPATPSPP PAAAIRVATP APSRRIREEP RTKRARETLC
RTPALVSTSL EEGEPFHERP VKRFRVSPCV AWQYTHPVPE PLARPRPTPV SWVSLLPEEV
TAHCLSFLPT VEDRFALQCT NRQFRRISNE KPMMQHVAVA GDRETGMRGI LQEHDTPETA
AVALTPFCQA GNLEAIYMLG IIKSYCHQDV QDGIALLKRA SRAGYVRATY ALGLVLRDND
PKEASRYMRK AAHKGYLPAL QEWLPAREMK RRYGEPLAEN LREYLDPFGL NRLLARHYVR
DKPLRNLNTS HCWNPLCGRW AFKAHTAHVV EEPVDVRVSR MKMCSRCCRA KYCSKLCQVY
DWRSGRHKTE CQFL
|
|---|
| |