Gene PHATRDRAFT_43695 details

Gene Information

• Locus tag: PHATRDRAFT_43695
• ID: 7197238
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 1209503
• End bp: 1212840
• Gene Length: 3338 bp
• Protein Length: 1060 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002177781
• Protein GI: 219112059

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.044454
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTATCAA ACCGACGGAA GAGAAAGATT CTCGGATGCT TTCTCCTCTT TGCGACTCCC 
ATTGACGGCT TGTTGGGAGT GACTTCAGCT CCGTCCTTGA CGCGGAAAAA GAGGCGTCAC 
TCAAAGTGGA GCTTCCTAAC TTCGCCGTCC TCAACAACGA GAGCAACTTT ACGATCGGGG 
AAAAGTAGCT GGCTAGAAGC TGCTCCTCAT CGGCAGGTTA ATACGAATGC AAGTTCACCT 
CCAACTGAGT CATTATCATC ATCATCACCC GCGACTTCAT TTATCAACAC GAACTCTCCA 
ACTTCATCGG CAAGTAGCGA TGCCCGTCAT ACGGATTCGC CATTATCCCA AATCTATGAG 
GACGACGAAC ATCCACGGGC ACCTCGACCG CCGCCGTCAT CTTTTTCGCG TAACGAAGAC 
TGGCTAGAAT CCGTTACGGG CGAATTACTC GATCTGGATG TGTACCCCCT GGGCAAACTC 
ACTGACGACG ATGTCGAATC GATTGCCGGT CTCATGGCAG CTTGGGCTCG GCGAAAGTCC 
GTCACCGCTG CACTTACAGT CGAGAGGTTA CTAAAACGAG TTGTCGACGA TTTGAAAGAG 
GGGAATCAGC GCGTGCATGT TACGACCCGA ATGTATTCCT GTGCGATTGA CGCCTGGGCG 
AAGAGTGGCG TCGAAGGCTC TTGCGAGCGT GCCGCCCAAA TTCACGATAC ATTGGTGCAG 
CACTATCAAA GTACCAACGA TCCACTTTTG GCACCATCTG TTATGTCCTT CAACACAGTC 
GTCAATGCCT GGGCGAAATC AAATCACGAC GATGCACCCG CTAAAGCTGA AGCTGTGTTG 
GAAGAAATGA TACAGGCATA CCGAAACGGC AACGAAGCGT TAAAACCGGA TGCGGTTACA 
TTTTCAACGA TATTGGATGC TTACTCGAAA TCCAATAAAC CCAACGCTGT AGCACGCTGC 
TACGAATTGT TTCAGGTTAT GGACGAGCTG GACGTCAAGC GGAACGTATA CACCTTTTCT 
GCGCTACAAA ATGTTGTGGC AAGATCTCGG ATTCCGAACG CGGCGGAGCA AACCATGAAT 
ATTCTACAGC AGATGCTCAA ATTGTACGAA AATGGAGACG TCTTTGCCAA ACCCAATACT 
TTAAATTACA ACGCCGTTCT CAACGCATGT TCGCGAACCC CGAGCAAAGC CAGCGCTCAA 
CTCGCCGACG ACTTGCTGCA TAGCATGGAG TTGCCCTTGA TACAAGGCGG TTATGATGTC 
GAACCCGATC GTCTATCCTA CGCCATGTGC ATACTAGCCT GTGCTCGCTG TCCTGACGAA 
GCATTCGGCG TGCCGAAGGC CGAGGCCAAT TTACGGCGCA TGGAAAGTCG GGCCATTATG 
GAAGCCGCCA AACGGCAACA GATCTCCAGC GCGGCGCCAC CTACTGTTAC ACTCGACATT 
GAATGTTTTA ACGTTGTGCT CACCGCCTTG TCCAGGCGTA AAAACATACC GCCGACACGG 
ACCTTAGAAA TTGTGAAACG CATGGAGGAA TACGCCGAGC AAGGACAGGA GCATTTGCGT 
CCGAACGTGC GTTCCTGGAA TGCCGTTTTG AACGCGTACG CCCGGGCCAT TGCGGTTTCA 
CCTCACTCAA CGGCTTCCAA CTCGTATGCT CAAATGGCCG CTGAGTTTCT CCAGCACATG 
CGCCTTGATC TGGGTATTCG GCCCGACGCG TTTTCGTTCG CCGCATTGCT TAGCGCGTTC 
CAAAAATGGG ACCATCCCGA AGCAGTCGCC CAGGCCGATG CTTTGGTTCG AGAAATGGAA 
TCCTTGTTCG AACAAAATGA GATTGACGCT CCGCCTGATG TGTATCAGTA CGTCGAAAGA 
TATAGAAAAT CTGTGTGCTT CTTTTCTCTA TGTTGACACA AGCTTTGTTC CTTTTCACTT 
CAAAAACCGC AGCTATACAA TTCTCTGTGG AGCCTGGGCT AGGTCGGGCC AAAAGATTGC 
CCCTCAACGC TGTTTGCAGA TTCTAGCACA CATGGTGGAA CGGCATCGCC TAGGCTATCC 
CAACGTGAAA CCAAACGGTT AGTATACTCT GTGTTGCCAT CATAGCTTTC CTCATGTGAC 
TCATAATGTG TTTTTGCGCT ACTGTAGTCC GAACATACAA TGCCGTGTTG GATTGTCTTG 
CGCGCGCTGG CGCGGAAGAC CGTGCTGAGC AATTGCTGTT TCATATGTTA AAATTGTATC 
GAGACGGAGA TCATGATGCC GAGCCCGATG CCTTCACGTT CAATTGCATC ATTCACGCGT 
TCTCTAAATC TCGACGAAAG GGCGCCGGTC GGAGGGCCGA GTCAATTCTG GACCGTTTTT 
TGGAATACCA CGAAGAAGAA AATCAATCGA TCCGTCCCGA CACGCGATCA TTTACCCACA 
TTATTGCTCA TTATGGTCGA AGCCGTGAGT TGGATGCCCC ATATCGAGCC GAGTACGTTT 
TAAATCGCAT GGTATCATTG TGTAAAGACG GCAACAAAGA TTTAGCCCCG AACCTGTTTG 
CCATCAAAAC TGTTGTGGAC AGTTACTCTC ACGCGAAACA TCCCGACGCT GGTCGTAACG 
CCGAGCGCTT TTTAAATCTG ATTCGAGAAT TGAGGGAAAA GCATGGCATT ACTAGACTTG 
AGCGTGATAC TTCATTTATG AACAGCGTGC TGTTTGCGTG GTCGAGCTGT GGCAGCGAAG 
ATTCCGGTCA TCGCGCGGAA GGTCATCTGT TGGAAATGGA AGACAGTTTT GACCAAGGAA 
CCATCTCTTT TCGACCGGAC TCGCGAAGCT ACGAAATGGT GCTGTCGGCG TGGGCAAAGT 
CAGAAAGCAG CGACAAAGCG AAGCGTGCGT TGCTGACTCT ACGTCGTATG CAAGAGCAGC 
AACGGACCGG CAATCCGTTT GTCCGAATTG ATGAAGCCGC TTATTCTTTT GTCATTAATG 
CTTGCGCCTT CAGTAATGCC GGCGAGGATC TCGAAGCTGA AGCATTCACA ATCGCAGTAA 
AGCTGTTAGA CGAAATGCTG GAGTCTAAAA GCGTTCATCC CAGCTCACTT ACATACGGAT 
GGTTTATTCA GGCATGTGGA CGCCTTCGTG TGGCGCACGC ATTAAAAAGT GTCCAAATAG 
GAAGGGCATT TCATCTTTGT TGCGAAAATG GTTTAGTAAA CGACTTTGTT TTGCATCGGT 
TAAAGGGAGC GGCGCCAGAT CCAGTCTTCA AGGAGTTGCT GGCTCCTGTT TTGAGCAACT 
TACCTCCTCG TTTTCCGAAG GGAAGGCTCG CAGTAAATAA CCTCCCATCA GATTGGACTT 
GCAACGTCCA CGGGAACAGA AAAATAAGAC GGCAATAG 

 

Protein sequence

MVSNRRKRKI LGCFLLFATP IDGLLGVTSA PSLTRKKRRH SKWSFLTSPS STTRATLRSG 
KSSWLEAAPH RQVNTNASSP PTESLSSSSP ATSFINTNSP TSSASSDARH TDSPLSQIYE 
DDEHPRAPRP PPSSFSRNED WLESVTGELL DLDVYPLGKL TDDDVESIAG LMAAWARRKS 
VTAALTVERL LKRVVDDLKE GNQRVHVTTR MYSCAIDAWA KSGVEGSCER AAQIHDTLVQ 
HYQSTNDPLL APSVMSFNTV VNAWAKSNHD DAPAKAEAVL EEMIQAYRNG NEALKPDAVT 
FSTILDAYSK SNKPNAVARC YELFQVMDEL DVKRNVYTFS ALQNVVARSR IPNAAEQTMN 
ILQQMLKLYE NGDVFAKPNT LNYNAVLNAC SRTPSKASAQ LADDLLHSME LPLIQGGYDV 
EPDRLSYAMC ILACARCPDE AFGVPKAEAN LRRMESRAIM EAAKRQQISS AAPPTVTLDI 
ECFNVVLTAL SRRKNIPPTR TLEIVKRMEE YAEQGQEHLR PNVRSWNAVL NAYARAIAVS 
PHSTASNSYA QMAAEFLQHM RLDLGIRPDA FSFAALLSAF QKWDHPEAVA QADALVREME 
SLFEQNEIDA PPDVYHYTIL CGAWARSGQK IAPQRCLQIL AHMVERHRLG YPNVKPNVRT 
YNAVLDCLAR AGAEDRAEQL LFHMLKLYRD GDHDAEPDAF TFNCIIHAFS KSRRKGAGRR 
AESILDRFLE YHEEENQSIR PDTRSFTHII AHYGRSRELD APYRAEYVLN RMVSLCKDGN 
KDLAPNLFAI KTVVDSYSHA KHPDAGRNAE RFLNLIRELR EKHGITRLER DTSFMNSVLF 
AWSSCGSEDS GHRAEGHLLE MEDSFDQGTI SFRPDSRSYE MVLSAWAKSE SSDKAKRALL 
TLRRMQEQQR TGNPFVRIDE AAYSFVINAC AFSNAGEDLE AEAFTIAVKL LDEMLESKSV 
HPSSLTYGWF IQACGRLRVA HALKSVQIGR AFHLCCENGL VNDFVLHRLK GAAPDPVFKE 
LLAPVLSNLP PRFPKGRLAV NNLPSDWTCN VHGNRKIRRQ