Gene PHATRDRAFT_43671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43671 
Symbol 
ID7197226 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp1147525 
End bp1148492 
Gene Length968 bp 
Protein Length192 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178086 
Protein GI219112669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATTG TACAAGAGAA ATTGCAGGTT CTACGAACCA AGCTGGACAA GTATCCAGTG 
TTGCAGCAAG CCGAGGTGTG TAAGGACGCG CGGCGGCTTG GAATTTCGTA ACAAAGCGAG
CGAACAAAAG TGTATTTCAA TATTCTGCAA GGGTTCTTGT GGATTTTGTG CATGATACGA
TGTTACCGTT GGTCTTCGAA ACTAATACGC TTCGACGTGG GACGCTCATA ATATCTGATA
CCGTATCCTA AAAGTGAAAG TGTTTTCCAA ATCGTTTGCT CAACACTCGC TTTCTCATTG
TTCATGAAAA ACTCACTCAC CATCAATTCT TCTTGTTCTT CTTGTTGCAG TCAACGACTA
GTGTTCCCAA GGAGTTTCTC GTCCTCGGGG GCGGGTTGCT GTTTGCGGTC TTGACTGTTT
TCGGAATCGG CATTGCGTCT CTCACTAGCC TCGTCGGCTT TGTCTATCCC GCTTTCAAGA
GCTTTCAAGC GATTGAAACA AAATCAAAGG GGGACGACAC GCAGTGGCTG GTGTACTGGG
TCATTTTTGC TTTTTTCAGT ATCATCGAAG TGTTCGTGGA CGTCCTTTTG TACTGGATCC
CGTTCTACTT TGCATTTAAA CTCGCCTTTC TGCTTTGGGC CATGTTGCCT CAAACCAAGG
GTGCCAAGTT CTTGTACGAG AGTTTCCTCA AGGATCTTTT GAAAAAGAAC GAATCCAAAA
TTGACCAAGC TTTGGCGAAC GCAAAGAAGA ACTCGGGCTC GTTCGCCTCG GAATTTTCGA
ACGCAGCTTC GGACATTGCC ACTTCCGCCG CCTCGGCCGT TTCGTCGACC CAAGAAAACA
AGAAGGTCAC GTAGTCTACC TTGGCCTCTT TGGGGTTGCC CTGCCGCAGT GTGCAGAGGT
GCGAAGGCTG TTTGATTCGT AACGCACCCT ATGCATGCCT TAAATATCGT CTATGGTTTG
TCTGAAAA
 
Protein sequence
MDIVQEKLQV LRTKLDKYPV LQQAESTTSV PKEFLVLGGG LLFAVLTVFG IGIASLTSLV 
GFVYPAFKSF QAIETKSKGD DTQWLVYWVI FAFFSIIEVF VDVLLYWIPF YFAFKLAFLL
WAMLPQTKGA KFLYESFLKD LLKKNESKID QALANAKKNS GSFASEFSNA ASDIATSAAS
AVSSTQENKK VT