Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43671 |
Symbol | |
ID | 7197226 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 1147525 |
End bp | 1148492 |
Gene Length | 968 bp |
Protein Length | 192 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178086 |
Protein GI | 219112669 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATTG TACAAGAGAA ATTGCAGGTT CTACGAACCA AGCTGGACAA GTATCCAGTG TTGCAGCAAG CCGAGGTGTG TAAGGACGCG CGGCGGCTTG GAATTTCGTA ACAAAGCGAG CGAACAAAAG TGTATTTCAA TATTCTGCAA GGGTTCTTGT GGATTTTGTG CATGATACGA TGTTACCGTT GGTCTTCGAA ACTAATACGC TTCGACGTGG GACGCTCATA ATATCTGATA CCGTATCCTA AAAGTGAAAG TGTTTTCCAA ATCGTTTGCT CAACACTCGC TTTCTCATTG TTCATGAAAA ACTCACTCAC CATCAATTCT TCTTGTTCTT CTTGTTGCAG TCAACGACTA GTGTTCCCAA GGAGTTTCTC GTCCTCGGGG GCGGGTTGCT GTTTGCGGTC TTGACTGTTT TCGGAATCGG CATTGCGTCT CTCACTAGCC TCGTCGGCTT TGTCTATCCC GCTTTCAAGA GCTTTCAAGC GATTGAAACA AAATCAAAGG GGGACGACAC GCAGTGGCTG GTGTACTGGG TCATTTTTGC TTTTTTCAGT ATCATCGAAG TGTTCGTGGA CGTCCTTTTG TACTGGATCC CGTTCTACTT TGCATTTAAA CTCGCCTTTC TGCTTTGGGC CATGTTGCCT CAAACCAAGG GTGCCAAGTT CTTGTACGAG AGTTTCCTCA AGGATCTTTT GAAAAAGAAC GAATCCAAAA TTGACCAAGC TTTGGCGAAC GCAAAGAAGA ACTCGGGCTC GTTCGCCTCG GAATTTTCGA ACGCAGCTTC GGACATTGCC ACTTCCGCCG CCTCGGCCGT TTCGTCGACC CAAGAAAACA AGAAGGTCAC GTAGTCTACC TTGGCCTCTT TGGGGTTGCC CTGCCGCAGT GTGCAGAGGT GCGAAGGCTG TTTGATTCGT AACGCACCCT ATGCATGCCT TAAATATCGT CTATGGTTTG TCTGAAAA
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Protein sequence | MDIVQEKLQV LRTKLDKYPV LQQAESTTSV PKEFLVLGGG LLFAVLTVFG IGIASLTSLV GFVYPAFKSF QAIETKSKGD DTQWLVYWVI FAFFSIIEVF VDVLLYWIPF YFAFKLAFLL WAMLPQTKGA KFLYESFLKD LLKKNESKID QALANAKKNS GSFASEFSNA ASDIATSAAS AVSSTQENKK VT
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