Gene PHATRDRAFT_43654 details

Gene Information

• Locus tag: PHATRDRAFT_43654
• ID: 7197364
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 1111876
• End bp: 1113991
• Gene Length: 2116 bp
• Protein Length: 629 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002177754
• Protein GI: 219112005

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.769463
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGCTACCTTA CCCCGTCACT TGTTCCAAAG ACGCCGAGCA TTCTACGATT GAATCACTAA 
AATGGAGAGA TCCGGTAGAG ATGAAAATGC TGAACCGGAA GTCCGCAAAC GAAATCGTCG 
AAGGTTGCTT TGGTGTTCTT CTTCGGCGCT GTGTGTTGTT GCCGCAGCTC TTAGCAGCAA 
CGGTTTGTCG GCCTCGCTTA CAGGAAAGTC ACTACCTTTT CCAGCGTTAG GCCATCTGCT 
TCAGTCTTCG ATGCCGATCT TGGAAGACGA TGATGAACGG TTGGGTATGA AATCGTCCAA 
GCGAATGCTA GAAGATGCTG CTAATGGGAA TACTAGTGGA CAGGATGATG CACAACAAGA 
CGAAAGTCAG CAAGTCACCG ATGACCAAGC AGGTATCAGC GCCCAAGATC AGGATGACGA 
CAGCCAAACG GCTGGAGACG ACGACCAGAA GCAGACGGAA GAAGAGGAGC ATCGAGGTCC 
AGACCAAGAC GATTGGTTTC GAGATGGCTT TGCCGACGAC ACTTTTACCG ACGATGATGC 
GAAAAATAGG TACAGTGAAG TAGACGATTT TTATGCCTAT GTTGGCGACC CGCGTCCTCC 
GAAGCTAATG CCACTTTCGA GTCGAGAAGT AATTGGATAC TCTGTAGTGG CAATGGCGTT 
GACTCTTGGA GCTAGTGGAG GGATCGGTGG TGGTGGAGTC GTCGTACCGG TTTATCTCCT 
CGTCATGGGA TTGCATCGTA AGTTTACGTG TGGGTTCAAT AGCCATTTGG ATACTCAAAC 
CTCACCTATT TATTTTGTTG TCTGAACTTA ATCACCAGCT CATTACGCCA TACCTATCGC 
CAGTGTCACC GTTTTCGGAG GGGCACTCGC TAGTACTATC GTGAACATGC AACGTCGACA 
TCCACTAGCG GATCGTCCCA TTATTGACTG GGACCTTGTC TTAATGATGG AACCATTGAC 
ATTGATTGGG ACACTACTGG GTACCCTGTT TCATCGGATC TTGAGCGAAA AGATTTTGAT 
TGTTTTACTA GTCTTGCTTT TGAGCATAAC AGCTCACTCA ACGTTGAGCA AAGCCATGCG 
CATGTATGAA GCTGAAAAAC GCTATATTCG GCATCTTATA GCCGCCCAGG CCGATTCTCC 
AAGAGGAAAC CCATCACTCG GAGGCTACGT GCTCCCGTTC GGTGACGAAG ATGACTCTCG 
GGCTGATACT GGTTGTAAGG AAGAAGCCAG AATGGCGGCA GAAGAGCGTC AACGTATTTT 
GATTCTTAAT CCAGACTTTC GAACGATGAA AACAGATTTG CTAGAGCAAG AGAAAGTGAC 
CCCTCGAAGC AAGATCATAG CGCTTTGCTG CATGTTTTCC GTACTTATCT TTTTGAATCT 
CATGGTTGGT GGAGGTTCTT TCGATAGTCC ATGGGACATC AAGTGCGGCT CGACCGCATT 
TTGGGTGGTG CATGTTGTAA TGATTGCATT TTTGATGTCA TCAGCGTGGA TGGCACAAAC 
ATATCTCATT GCTCGACACG AGATCAAGGA TATGGTTCGA TTTGATTATG TCCACGGAGA 
TATCAAGTGG GATACTCGCA CATCCATTAT CTATCCAGCT GTATTCACCA TCGCTGGGGT 
TTTCGCTGGA ATGTTTGGCA TTGGTGGAGG TGTCGTCATT GTGCCGCTCT TACTGCACTC 
CGGAGTGCAT CCTGGCGTTG CGTAAGTTCT ACATATCCTT TTACTCTTTT GTCGGTGATG 
GCTACCTTGA CTTAAGTTCT AATTTGTGCT TTCACCATTG AGCAGATCCG CAACATCTAG 
CGCCATGATT CTGTTTACAA GTCTCGCATC TGTCTCCACC TACTTCGTTT TTGGTTTAAT 
CGTTGCCGAC TTTGCCATGG CCGGCTTTGT CATCGGTTTC ATATCTTCTA CTCTAGGACA 
AATTCTCATG CGTCGAGTCC GCCAAGCCAA AAGTGCCAGC GGACGCAAGT TTGAGCGCAA 
CTCTTACCTC GCTTTTGTAA TTGGTGGCGT CGTCTTAGTG TCTGCCTTGC TGATGACAAT 
TCAATACGTC TTCATGATTG TCGATCAGCC CGACGAAGAT ACGTTTGGTG GTTTGTGCGA 
TGGACTGCGA TTCTAA 

 

Protein sequence

MERSGRDENA EPEVRKRNRR RLLWCSSSAL CVVAAALSSN GLSASLTGKS LPFPALGHLL 
QSSMPILEDD DERLGMKSSK RMLEDAANGN TSGQDDAQQD ESQQVTDDQA GISAQDQDDD 
SQTAGDDDQK QTEEEEHRGP DQDDWFRDGF ADDTFTDDDA KNRYSEVDDF YAYVGDPRPP 
KLMPLSSREV IGYSVVAMAL TLGASGGIGG GGVVVPVYLL VMGLHPHYAI PIASVTVFGG 
ALASTIVNMQ RRHPLADRPI IDWDLVLMME PLTLIGTLLG TLFHRILSEK ILIVLLVLLL 
SITAHSTLSK AMRMYEAEKR YIRHLIAAQA DSPRGNPSLG GYVLPFGDED DSRADTGCKE 
EARMAAEERQ RILILNPDFR TMKTDLLEQE KVTPRSKIIA LCCMFSVLIF LNLMVGGGSF 
DSPWDIKCGS TAFWVVHVVM IAFLMSSAWM AQTYLIARHE IKDMVRFDYV HGDIKWDTRT 
SIIYPAVFTI AGVFAGMFGI GGGVVIVPLL LHSGVHPGVA SATSSAMILF TSLASVSTYF 
VFGLIVADFA MAGFVIGFIS STLGQILMRR VRQAKSASGR KFERNSYLAF VIGGVVLVSA 
LLMTIQYVFM IVDQPDEDTF GGLCDGLRF