Gene PHATRDRAFT_43643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43643 
Symbol 
ID7197357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand+ 
Start bp1082614 
End bp1083345 
Gene Length732 bp 
Protein Length217 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177748 
Protein GI219111993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.173283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAGCATACG CGTGATCCAC TCTTCGTTGT ATGCTATCGA ATTTAACCCA AAACTTGATT 
CGGTAATAAG ATACAAGTAT GCTTCGTGAA GGCCCCTTTA GATTGACGGC CGTTGTAGGA 
TTCGCCTACG CCTACATGGT GAAAGGCGCG ATCAGCGCCA CCGCTCTAGC GCCAGCTGAC 
TTTTCCTCTC GACGCGGATT CAGCATCCAA ATAGCTCAGC TAGCCGGTAC CAGCGGTTTC 
TCTTTCTCCA TTCCGGGGGA AGCCGGAGCT CAAGATGAAA CGGACAAGCA AAAAATACTG 
CAAGGGTACC GACGATTAAA TCAGCTTCTT GATAATTGGG AACGCGAAAC GACCGTTTGC 
GGTTTGACTG ATAATCCTTA CGTCGGAACC AGTGCGTTCG GTAAGACGGG ATGCGAGCGA 
ACGCCGCTTA AAGTTATGGA GTATATGGGC TATCGAAGCG TCAACGATCC ATTGTTTAAG 
GCCGAAAAAA CTCTTCGTCG ACTAGAAATT CTCGTCCCTC CAGATCGCGA AACTGAGTAT 
CTGGAAGCAG TCGAAACATG GTCGGAAAAA GCGGACGAAG CAAGTGGCAT GGCTTACATT 
TCCTCTTGGG GGGAAGCAAA TCCAGGTGGA GGAAAAGACC GAATCGATTA TTTTATCGAG 
CGGGCGAAAC GAGATGTGAC AGAAGCCCGC AATGCTTTGG GGACTATTGT ATCTATCTTA 
CAAATAGAAT GA
 
Protein sequence
MLREGPFRLT AVVGFAYAYM VKGAISATAL APADFSSRRG FSIQIAQLAG TSGFSFSIPG 
EAGAQDETDK QKILQGYRRL NQLLDNWERE TTVCGLTDNP YVGTSAFGKT GCERTPLKVM 
EYMGYRSVND PLFKAEKTLR RLEILVPPDR ETEYLEAVET WSEKADEASG MAYISSWGEA 
NPGGGKDRID YFIERAKRDV TEARNALGTI VSILQIE