| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43602 |
|---|
| Symbol | |
|---|
| ID | 7197328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | + |
|---|
| Start bp | 944103 |
|---|
| End bp | 945268 |
|---|
| Gene Length | 1166 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177723 |
|---|
| Protein GI | 219111943 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0174997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGTTT TAAGTGAACT ATCAAAGGCT TAATGGACAT TGGCTGGGAA TAGAGCGTAC
AAGCCAATGA ATCAAAGACA GGACTTGCTG CGTCAATAGA ATTTGGACTC GCTACTGACC
GTTCTGAGGT TGTCATGTTG GGTATTCGTC GCCTGGAGAT AGCCGTCGTG GGCATCTTTT
CGTTCTACAT TGGTCTGACC ATGTATTTCC ACTCCCGCCT GTATCGACAA GCGAACCATT
CGTCGCCTGG ATTTTTTTTT GTACAACAGG CTTCTCCGCA TAACAAGGGC CAGTTTAAAA
AGGACAAACG ACGGCAGCGA CGGCGGAAGA AACGAAGTTG GGACCCTGGT CTGGACGGGC
TGGGCGGTCT GCCAGTGCCA CTGAACATTA ATCTTCCCAT ATTCTCCCCC AGTCTTCCAA
AGAGCGGAAC AACATCGCTG TGGCAGTATT TTAATTGCGG TGGCCACGCT TCGTCGCACC
AGTGGGTTAA GTCGAATGAA ACATACAGCA TGCAGTCCGG ACAATGCATT CGGCAGAATG
TTTTAAAAGG TCGACCGCCT TTCGAGGGAT GCGGTGGGTA TGAGGTCTAC ACAGACACTG
GCTACGCCAA CTTTCTTCCC CCAAGTCCTG GCCAGCTCTT CACTCCTGTC TCCTGCTACT
ACCCGTCGGT GGATGCTTTG GAAGAGATAT ATCAGCACTA TCCTAACTCA ACCGTGGTTA
TGGTTGTGCG CGATACCAAT AGTTGGTACA AAAGTATGAC GGAGTGGGGT GAGGGCTCAC
TGCTCAAGCG GTGGAAGTTG TGCAACGCAA CAGGCTTTCC ATCGATGAAC GCCGAGCCCA
AAGATTTCTT AAAATTTTAC GAATGGCACA CTGCGAACAT TCGCCGATTC GCCAAGGCTC
ATCCAACTAT GAAGTATGTA GAAGTCCGAT TAGAGTCCAA CGAGACGGGT GGTATTCTAG
AGCGGGAGAT TGGAATTCCA CGAAAATGCT GGGCCAAGTG CACTCCAGCT TCTAAATTTT
GTCAGCCTAC CAAACAATCA TAATAAGACG GAACAAATGC CTGGGCATGC ATCTTGCGTG
CTCTTAAATT AAACCAGTGA CGTAAAAATG GAAGACGAGT GTAAGTTCTA TTTATCTCCA
AAATCTAGCT ACAACAATTG ATTGCT
|
|---|
| Protein sequence | MLGIRRLEIA VVGIFSFYIG LTMYFHSRLY RQANHSSPGF FFVQQASPHN KGQFKKDKRR
QRRRKKRSWD PGLDGLGGLP VPLNINLPIF SPSLPKSGTT SLWQYFNCGG HASSHQWVKS
NETYSMQSGQ CIRQNVLKGR PPFEGCGGYE VYTDTGYANF LPPSPGQLFT PVSCYYPSVD
ALEEIYQHYP NSTVVMVVRD TNSWYKSMTE WGEGSLLKRW KLCNATGFPS MNAEPKDFLK
FYEWHTANIR RFAKAHPTMK YVEVRLESNE TGGILEREIG IPRKCWAKCT PASKFCQPTK
QS
|
|---|
| |