| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43598 |
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| Symbol | |
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| ID | 7197321 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 917037 |
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| End bp | 919519 |
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| Gene Length | 2483 bp |
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| Protein Length | 758 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178033 |
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| Protein GI | 219112563 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00579504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTACCATTCA AACTCTGGAG CAAAATGAAT TTTACACAAT TCTCTTCCGT ACAATTCTCA
AGAATGGTGA ACATGCGGCG CCTCATCGGC CTTTCGCTAC TCTTCTTTTT GTCAGCGGCA
GCTTGGCTGC CGCCATCGAC TGTTATTTCC CGGAAAGCAC GATGTGCAGC CAGAGTTAGC
TCGGTTGAAT ATGTCAGATT TACAAATGCA ATACGGAAAA GTCGGTCCTC GCCTAGTCGC
CCAAGCACCG AGATGTTCAT GGGCATACGC GACTTGCTTC GCAAGCGCGC CAAGGACGAT
GATTATGATC AGCCAAAAGG CGGCAGCCCG TCCATACAAA AGCAATCACC TAGCCCTTCT
GCAGCTCAAC TCGTACCCGA ACACGCTTCG AAAACCGAGA CGGAGACGGC GATGCCCATA
GTCGACAAGA GTGAATCAAG GAAACAAGTT TTACACGAGC GCGCTCCAGT TCGTATGGGA
GAAGACCCCG GTACGAAGAC TGTCAACGTC CAATCTTTGG ACTCTCACGA GTCGGTCCAG
GATAGAATCA ACCGCGTTAA GGCAGGCAAG ATGACAGAGG GCGAGAAGGA AGCATTTCTG
GATTCCGTTC TCACAGCGGG AAATACGCCT GAATCTCGCA AGCCACTTAT TCGTAGTTCT
CGAGGAAAGT CGGAAGGCAA GCTGTCGAAG AAGGAATCGA AAGCGTCACC ATTCCCCTCG
GATTCTATAC TTCGCAACCT GGCACGTGGG CTGAACGCTG ATTCCGTACA GAAATCTGAT
TTTATGGAAA AAACAACGTT GGAAAATCAG CGCAAAAAGA AGGAATATCT AGAAATGGTG
ACGGACCCTG ATCGCTTCAA TCGCCTCTCT ACTACAAACA GCTTGCAACG GTCTCCAGGT
CTTTATCCAC AGTCAGGCAG CTCCGCCGCT GAATCAAAGA CACCCGTTTC GTCTCTTGGG
GGTTTACAGT CTTCTAAGAA CAAGTACCTT CCAAACCCGA CTGGGCCTCC TCAGGAGCCG
GTATCGCCTC CAGATGATTT GCCTTTGCCG GGGGATCTCG GGGCTCGACT AGGATCTGCC
GCCATGGAAC ACGAACGCCT CCGACAGCAA GCCGAAGAAG AACGACGTGA GCGGGAGTGG
CAACAGAAAG AAGAGCTCCG ACTTGAGCAG GAAAGGAGAG CGGCAGAAAT TGCAAAAAGG
CGTGAAGAAG AGTTGGATCG ACGCGAAGCA GAAATCAGAG AGCGACGCCG TCGCGACCAA
GATAACCTGT CTAGAGAAGA GAATGAGCGG AAAGAGGCAC AGCAACGACG TATGCGAGAC
ATGATGAAAG CACAAGAAGA GTACTGGATC AAAAAATTGT CAAGGGAGAA GGAGTCAAAG
GCCAAAACAG AAATCAAGAA AGAAGTCGAC ACAGATGAAC AGGAAAAAGA CGACACGGCA
CAAACGACTT CCACATCACC TACCGCCCGC GTTCAAGTCC CGGAATCGTC CACGAGATTT
AATCCTGACG AAAGGTCACT GTTGAGCGAT GTAAGTATCA CTTGGTTACG TACAGGTCGG
CAGCACGATT TTCTAATTCT ATCCCTTTGG CTTGAGGTGC AGGCGTTGAA TGATCACTTG
GCTGACTGGG ATAAGAATCA AGATGTCATT GAAAAATCAG CTAAACGAGC GCTAGGCGTA
TCGCCTTCTG TAAGTGATGT CGGCTACCAT AAACAGAGCG AACGCGACTT TATGGCGGAG
CAAGCCCGCA AGAAGTCCGA AATCGAAAGG GCGAGACAAG TACAGCTGGA AAAGCTCAAA
GCTCTAAACT CGCCGCTTCC GACCCCTCGA AACTCCAGCT ATGCGCCTCG GGCAGCTCCT
GTATTTAATC CACAGCGACC TGTCTCGGCT TCTTCACCTT CTTCTCGACA TAAGCTTGGG
AATCTTGTCC GAGGAAGAGA AGGAGGAAGT GATCAAAACT CTGGGAGCCC CTCTGGAAGT
CCATTGAATA GTGACGATGT CAATCGAAGA AAAACTATCT CTAAACTAAA TGGAGCGACA
CTAGGCTCGG GGGATTCTTC GTGGGATCGA GACCAACCGC AGAGTGGGGG GTCTCTTGAG
CAACCTCAAA GCAGCGCGTA CCAAGCAGAG GGCAAGGAAA CTCGTCCGCC GTCTTCGGGG
GAGTCTCAAA ACAGAGGACC AATTCGAATG GAGCTACCTT TGTTGGATGT TGAGTACGAC
CAGGACGAAG ATGGACTGGA CGTCCGTTCA AACAAGGCCA TGAGTATTGC CGACGCTATG
AAGAGATCAA ATAAAGGTGG AAGCGCTGAT CAATCGGAGA GAAGTAAAAA GTGGGGAATC
GACATGAATC GCTTTAATTG ATTGTTTTTA CGCTCGCTTC GCCGCAATAA CGAGGATAGT
TCTTTCACTT TATCATCACA AAGACGCCAT TTACTATGCT CGCAGAAGAT GGGGTCTAAT
TTAAAATTCA CTGTTTTCAA TGT
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| Protein sequence | MNFTQFSSVQ FSRMVNMRRL IGLSLLFFLS AAAWLPPSTV ISRKARCAAR VSSVEYVRFT
NAIRKSRSSP SRPSTEMFMG IRDLLRKRAK DDDYDQPKGG SPSIQKQSPS PSAAQLVPEH
ASKTETETAM PIVDKSESRK QVLHERAPVR MGEDPGTKTV NVQSLDSHES VQDRINRVKA
GKMTEGEKEA FLDSVLTAGN TPESRKPLIR SSRGKSEGKL SKKESKASPF PSDSILRNLA
RGLNADSVQK SDFMEKTTLE NQRKKKEYLE MVTDPDRFNR LSTTNSLQRS PGLYPQSGSS
AAESKTPVSS LGGLQSSKNK YLPNPTGPPQ EPVSPPDDLP LPGDLGARLG SAAMEHERLR
QQAEEERRER EWQQKEELRL EQERRAAEIA KRREEELDRR EAEIRERRRR DQDNLSREEN
ERKEAQQRRM RDMMKAQEEY WIKKLSREKE SKAKTEIKKE VDTDEQEKDD TAQTTSTSPT
ARVQVPESST RFNPDERSLL SDHDFLILSL WLEVQALNDH LADWDKNQDV IEKSAKRALG
VSPSSERDFM AEQARKKSEI ERARQVQLEK LKALNSPLPT PRNSSYAPRA APVFNPQRPV
SASSPSSRHK LGNLVRGREG GSDQNSGSPS GSPLNSDDVN RRKTISKLNG ATLGSGDSSW
DRDQPQSGGS LEQPQSSAYQ AEGKETRPPS SGESQNRGPI RMELPLLDVE YDQDEDGLDV
RSNKAMSIAD AMKRSNKGGS ADQSERSKKW GIDMNRFN
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