Gene PHATRDRAFT_43585 details

Gene Information

• Locus tag: PHATRDRAFT_43585
• ID: 7197315
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 882047
• End bp: 885579
• Gene Length: 3533 bp
• Protein Length: 1105 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002177709
• Protein GI: 219111915

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGTCGG ATAGAAAAGA ATACACAAAG AACGACGAGG AGCAAGGGGA CCAGGCGCAA 
GCTTTGCCTC CTTCCGAATA CTCGACGACC GAACGGAATC CACCGACACC AAATTGCGCC 
CTGCGTCAGG ACTTGTGCTC CGAAAACAGC TCATTAGTGT CCGACCTTAT TCAATCCGCT 
GCTCGGTCCG TCTTGGAAGA CGAGCACTAT GAGCAGGAAA GGAACGGTTC GTCGTGCTCG 
GGCTCTTACA CCGACATCGA CGGCGGTCGA AGAGGATACC ATACCTCTGG AATGACACCG 
AATTCACGGA AAAAGGGTCC ACTATCTCCA ACCTTGCAAT CCTTACAAAC TAAAACGCTA 
CCCGCCATGC CCGATGAACA AGATCGCAAG CGTTTCGTGG TGCGTACTTT TCCACATTCC 
ATTGTGCTCC CCTACAGGTG CAGGTTCTGA TCGTTTGGGG AGATTTTGGC TTACAAAAAC 
TCGGATCAAG TGTATTTCTC ATATACTTTT TGAGTTTGTC TCCTTTTTTG TTTCTAAAAT 
AGGGTTGTTT AGCAGCAGTT TTGGCGTCTC TTTACGATTT CGATGTGGTT GATGACGACG 
AAGACTTGTC TCAAGCCGAT AAAGTCCTGA GCATGGCATA CCTTGATAGA AGTGAGCAAG 
ACGACGAGGA CGAGCATAGT CTTAGTCCGA CCAAAGCAAG TCGTAACAAT ACAAAAGACA 
GCAGCAGCTT ATATTCGCGC TCAGTCGACG GTTTTGACAC ACCAGCCAGA GCGCAACAAT 
ACCGATCGAT GATTTCGTCT CGATCATCCA TGCAAATCGA TCGGGGCACC CGGGATCAGC 
TTCAAAAGGC TCGATCACGC CATCGCAAAC GGCGGTACGA TATATTGTCG GATCTTCTTT 
TGGCGTCAGG AGACTATTTG CAACTCGAAA GTGGCCAGGT CAAGGCTTTT TTACCTATGC 
TAGCCAAACT CCTGGTGCCG AACAGTGATA AAAAAGAGGC ATCGCATGCA TCTCAACTTT 
CAGCTCAACA TGGTCAGCGG CCGCACTCCA ATAGTAGCAA CACGAGCAGC AATTTGGCTG 
CTATGGACAA TCAGGAAAAG ACTATATTGC AACGCTCAGG GATCTCTGGC GCCAATGTGA 
ATGGCTTTAC AAATTCCGAA GAAATGGTGC ATCTTGAATT GGATGACATC GAGTATTTGC 
GGCCGTTCTT GGAATCACTG ACTCCTGGTG CCGGGTTGCG ATGTGTTGCG TTACTGCTCC 
TTCAGTATTT ATTGCTGCAC AGCCGTCAAA CGGGCTATGA CGCTCGTGTA CGACATGCCA 
TAAAAACGCT TGGTGTCCTG GTTCTGGTTC ATGACATGCA ACATGACCCC GTTGATGTGT 
ACATTGATGA TGAATTGAAA AAGCCTTCTT CTTCACCAAG GACTCGACGA CATCGAGGTC 
ATTTGAAGAC GTCGCATCCC GATTTGGTCG TACTGGCCAC CCGCAAGTTT GAATCGCTTG 
AACACTTTAT TGCAGCAAAA CTAATCGTGT TGTCACGTGA ACAGCAGGCA CATAAAGTTC 
ATAGGGGCGC CCGGAGTGCT GGTGCTCGCT CGTCTCAGAC TCAACAGACA CCAGCATCAA 
AAGGCCTGAC CCGGGAACAG TGGATGCGAG GGATTAAGAT TGGTGGCACG GCGATGGCAG 
CCGGTACCTT ATTTGCAATA ACGGGAGGAC TCGCCGCTCC AGGTATTGCC GCAGGGGTTG 
CGGCGATTGC GGGAGGGACG GCAGTGACAG CGGCCGCCGC GGCTGTCTTA ACAAGTACGG 
CAGCTGTGAC GACAATCTTT GGAGTGGGGG GAGGAGGATT GGCAGCGTAC AAAATGCAGC 
GGCGGACACA AGGTTTAACC GAGTTCGAAT TTCGTAAAGA AACTGGAAAG GCAAGTCGGG 
AGAAAGAGGG TCAAATAGAC ACAGTAGACG CTGAGCTGTT TAGTACAATC TGCATATCAG 
GTTGGCTCCG GGACAAATTC GATTTTCAAC GACCTTGGGG GGTCTCCCCA TCACGACCTG 
AGTTGACTGA TCGACAAGAG CTGTTGGAAA GATTCTACAC GATCCATAGT CCATCGCATA 
TATCACGTTG TGCCAAAATT TTGGACCATT GGAAAGGTGA AGAAAAGGAT CTTTGGGGTT 
TGCTCAGGCA AAAGTACGGG CAAGATCCAG ACCATTTATT TCCTTTGGAG AAAGGTCCTC 
GATTACACGC CTCGTTGACT CTTGAGCAGA AGGAGGTCAT AGATCAGTTG TTTGTAGAGC 
TGGGATACAC GCCCAAATCT CTGGACGAAA TAAAAACGCA GCCTACGCCT TTCGAAAGAA 
TTAGGAAGGG CTGGAATAAA CAAGCCGCTG GACCTCGACG CGATGAAAAT TTATCTACTT 
CACACATTCC TGTCGGTCCT GCACATCGAT CTCTTGCAGA TTCCTTACAA AGTCCTGAGA 
GTGTCGAGAC ATACGTTGGG TCTAGAGCTG AGGTTACATC GTCGGGATTT GAGAGCTTTT 
CTACTGCGCT GTCAATGCTT CCACCGGACA AGCGATCAGA TGAGTCGACA GAGAAAGTTG 
AGTTGCCAAG GCACATTGCT ACTGTTTGGG ACTATCCATC TATATATGGA GGGGAGCAGT 
ATACGGTACA ATGGGAAAGT GAACTGCTGA CTGAGTTGTG CGACTCTGTC AATGACCTTG 
CGCGAGATTT GGTAAGCGGT GGAACCGCTC AGATCTTAAA GCATACTGCT TTGTCAACGC 
TAATATCGGC CTTTGCTTGG CCGTACGCGC TTGTAAACGC CGCAAACATG ATTGATGGGA 
CGTGGACGCT AGCAGTTGAA CGATCCGATG AAGCGGGGAG AGAGTTGGCC AGAAGCTTGC 
TCCTCAGCCG GGCAGGCCAT CGTCCTGTTA CTCTCGTAGG ATTCTCCTTT GGCGCACGAG 
CAATCTATTC TTGCTTGAAA GAGCTCGCTC GCCTTCAGGA AAAATGGGAA GATTTTTGTG 
AAGACGAGGA TTCCTCTCGG AGCGGAAAAG TGTTGCAAAA CCAATCAGTC GCCGATTTAG 
AGTTAGACGA ATCAAACAAG GACTATTTCA GGTACATGCG AGAGCCGGCA AGCATAGTTG 
AAGATGTGGT ACTAATGGGA CTTCCAAACC ATCTTAGCTT ATCTTCTTGG AAGGCATGTC 
GCCAAGTTGT GGCCGGGAGG CTTATCAACT GCTTTTCTCA GAAGGATTTG ATCCTTTCAC 
TGATGTTTCA ATTCAAAAGG CTCGGGCTTA AGCCGGTATG TGGAACTTGT CCAGTTAACG 
TACCTGGGGT GGAGAATATT GATGTATCCG ATTTGGTATC CGGTCACCAG GATTACACTC 
TCGTTAACGG AGATATTTTG AAACGCGTGA GGCATTGTCA ACCTTTTCGA TCCAGGCACA 
CTCGTATATT TGTGCCGGAA GTCGCTGCAT CAAGCATGTA AATAAAAACT CTTGATGGAG 
TCGAGGCTCA GCGAAAAGTG CAAGTTTTAT TTCAGAGTAT TAAGCGAATC AAT 

 

Protein sequence

MESDRKEYTK NDEEQGDQAQ ALPPSEYSTT ERNPPTPNCA LRQDLCSENS SLVSDLIQSA 
ARSVLEDEHY EQERNGSSCS GSYTDIDGGR RGYHTSGMTP NSRKKGPLSP TLQSLQTKTL 
PAMPDEQDRK RFVGCLAAVL ASLYDFDVVD DDEDLSQADK VLSMAYLDRS EQDDEDEHSL 
SPTKASRNNT KDSSSLYSRS VDGFDTPARA QQYRSMISSR SSMQIDRGTR DQLQKARSRH 
RKRRYDILSD LLLASGDYLQ LESGQVKAFL PMLAKLLVPN SDKKEASHAS QLSAQHGQRP 
HSNSSNTSSN LAAMDNQEKT ILQRSGISGA NVNGFTNSEE MVHLELDDIE YLRPFLESLT 
PGAGLRCVAL LLLQYLLLHS RQTGYDARVR HAIKTLGVLV LVHDMQHDPV DVYIDDELKK 
PSSSPRTRRH RGHLKTSHPD LVVLATRKFE SLEHFIAAKL IVLSREQQAH KVHRGARSAG 
ARSSQTQQTP ASKGLTREQW MRGIKIGGTA MAAGTLFAIT GGLAAPGIAA GVAAIAGGTA 
VTAAAAAVLT STAAVTTIFG VGGGGLAAYK MQRRTQGLTE FEFRKETGKA SREKEGQIDT 
VDAELFSTIC ISGWLRDKFD FQRPWGVSPS RPELTDRQEL LERFYTIHSP SHISRCAKIL 
DHWKGEEKDL WGLLRQKYGQ DPDHLFPLEK GPRLHASLTL EQKEVIDQLF VELGYTPKSL 
DEIKTQPTPF ERIRKGWNKQ AAGPRRDENL STSHIPVGPA HRSLADSLQS PESVETYVGS 
RAEVTSSGFE SFSTALSMLP PDKRSDESTE KVELPRHIAT VWDYPSIYGG EQYTVQWESE 
LLTELCDSVN DLARDLVSGG TAQILKHTAL STLISAFAWP YALVNAANMI DGTWTLAVER 
SDEAGRELAR SLLLSRAGHR PVTLVGFSFG ARAIYSCLKE LARLQEKWED FCEDEDSSRS 
GKVLQNQSVA DLELDESNKD YFRYMREPAS IVEDVVLMGL PNHLSLSSWK ACRQVVAGRL 
INCFSQKDLI LSLMFQFKRL GLKPVCGTCP VNVPGVENID VSDLVSGHQD YTLVNGDILK 
RVRHCQPFRS RHTRIFVPEV AASSM