Gene PHATRDRAFT_43583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43583 
Symbol 
ID7197314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp875664 
End bp877294 
Gene Length1631 bp 
Protein Length224 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177708 
Protein GI219111913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.186583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAACATCCTT TGGAGCGATG GGATCGAAGA ACTGACAGTG AGGACCAACC CATGGTGACA 
TCCTCTGTAA GCTGCCTCTT ATCTTCTAAA ATCTCTACCG ACAGGCCCGG ATTGACTTTC
GGTCTCGAGC CGGCATCTGG CAACAACTAA AATTCCCGCT GTGCAGGGTG TTCCGGCCAA
GATGAGCAAC ATGTACGGGT ACAATGACTA CGATGGTCCG CATCGTGCAA TGGCTCGATT
CTCTCTGGAG GCCGACGACG AGGACAACCC ACTACAGGCT GGATTTTGGA TGGAAGGAGA
TTCATTGGCG CCCCCTTGTG GAACAGCCGT TCCAACGATT CATCGTATGC TGGATTTTGC
TCAAGTGTCG TCGAAGGACG TCGTATATGA TCTGGGCTGC GGAGACGCTC GCGTATGCTT
AGAAGCGTTT GCTCGAAAGA AATGCCAAAG TGTGGGCGTG GAGGTGGAGG CAGATTTGGT
ATCTAGAGGT CGGGAACTCA TTGCGCGACT CAATTATGTA GATCAAGAAC GCTTGCCTTT
CATTATTGAG CAGGATTTAC GAATCGTCCT CCGGAACCTT GTTCGCCTAG CTGCCAAAGC
TACAGCGCCA ACAGAACAGT CGGACGATAT TGGTGCTCTA CCTCTACCAA CAATCATCAT
AATGTATTTG CTTCCAGAAG CTCTGGCAGA ACTAGAGGAC AGCCTGAGAG AATTATTGCG
GCTATTGCCG GAGTCATTTC GGATACTGTG TAACACGTGG GGTCTCAATA GTCTTGTACC
CCAGCAACGA ATGGATGTCA AAGAAGAAGG TGGAGCGGTC ACCCCTCTAT CTATATATAC
ACGCAAAAGC CTTTGACTCA ATCTATAGAT CATTGTCGCT TGTCCCAAAA TGGTCTACTG
GCATGACAAA GGTGTAAGTA GCTTATTCAC CTCATGCAAG AGAAAGAAGA ACACCACGAC
TTTAATTGGA AGCAGTTGAT TAAAATCAAT CCCTTTCGAA GTGGCATAAG AGCACAAGCA
GAAAAAATCT CGGAAAACAT GCGAAGTCCA ACATTTCGGC CATTTCTATA TTTAAATGGG
AGCTGGGTGG ATGCTTAAAG CTTGGTGTGG CTGGATCGGC AGTTTTTAGA GTGGGAAAGC
ATTTAGCCAT ATCATTCCTT CAGCAGGCTC CTCGCTTTGT CAGCTGGCAC CAGAAAATTC
CATCGCCCTC AACAGTTGCC TGTTCAAATT TTTAATGACA CATCTCTTTC AGCCATGGCG
GTTCGGTTTC CTGTAACACT GTGAGCGACG CTGGGACTCG TTTCTGACTG GTCCCACGGT
TTATTTGGAA TGAAATCGAC TTTAAAGGTT TTGAGTCGGT ACGCACTAAA TCTCTTTTTC
AAGGATGTCG TTCATGTCAA TTTTAAGACT GTCTATTGAC CAGCCGCGAT CGAATTGGTT
TGGTCGCATA CAAGCGTTTC ACTGTCAGTA GACAAAGGAT TTGCCTAAAC CGTTGTGTTT
CGTGTTTCGT AGGATACTCA CGGAGCAACA AGATCTAAAA TATTATCCTC ATAGCGCTCT
AGCTGAAGCC GATGAGGTAA ATACGGCCGA GAATAGGTTT AATTTTAAAC TTGAACAAAT
GTGTCTTGTT C
 
Protein sequence
MSNMYGYNDY DGPHRAMARF SLEADDEDNP LQAGFWMEGD SLAPPCGTAV PTIHRMLDFA 
QVSSKDVVYD LGCGDARVCL EAFARKKCQS VGVEVEADLV SRGRELIARL NYVDQERLPF
IIEQDLRIVL RNLVRLAAKA TAPTEQSDDI GALPLPTIII MYLLPEALAE LEDSLRELLR
LLPESFRILC NTWGLNSLVP QQRMDVKEEG GAVTPLSIYT RKSL