Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43583 |
Symbol | |
ID | 7197314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 875664 |
End bp | 877294 |
Gene Length | 1631 bp |
Protein Length | 224 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177708 |
Protein GI | 219111913 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.186583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAACATCCTT TGGAGCGATG GGATCGAAGA ACTGACAGTG AGGACCAACC CATGGTGACA TCCTCTGTAA GCTGCCTCTT ATCTTCTAAA ATCTCTACCG ACAGGCCCGG ATTGACTTTC GGTCTCGAGC CGGCATCTGG CAACAACTAA AATTCCCGCT GTGCAGGGTG TTCCGGCCAA GATGAGCAAC ATGTACGGGT ACAATGACTA CGATGGTCCG CATCGTGCAA TGGCTCGATT CTCTCTGGAG GCCGACGACG AGGACAACCC ACTACAGGCT GGATTTTGGA TGGAAGGAGA TTCATTGGCG CCCCCTTGTG GAACAGCCGT TCCAACGATT CATCGTATGC TGGATTTTGC TCAAGTGTCG TCGAAGGACG TCGTATATGA TCTGGGCTGC GGAGACGCTC GCGTATGCTT AGAAGCGTTT GCTCGAAAGA AATGCCAAAG TGTGGGCGTG GAGGTGGAGG CAGATTTGGT ATCTAGAGGT CGGGAACTCA TTGCGCGACT CAATTATGTA GATCAAGAAC GCTTGCCTTT CATTATTGAG CAGGATTTAC GAATCGTCCT CCGGAACCTT GTTCGCCTAG CTGCCAAAGC TACAGCGCCA ACAGAACAGT CGGACGATAT TGGTGCTCTA CCTCTACCAA CAATCATCAT AATGTATTTG CTTCCAGAAG CTCTGGCAGA ACTAGAGGAC AGCCTGAGAG AATTATTGCG GCTATTGCCG GAGTCATTTC GGATACTGTG TAACACGTGG GGTCTCAATA GTCTTGTACC CCAGCAACGA ATGGATGTCA AAGAAGAAGG TGGAGCGGTC ACCCCTCTAT CTATATATAC ACGCAAAAGC CTTTGACTCA ATCTATAGAT CATTGTCGCT TGTCCCAAAA TGGTCTACTG GCATGACAAA GGTGTAAGTA GCTTATTCAC CTCATGCAAG AGAAAGAAGA ACACCACGAC TTTAATTGGA AGCAGTTGAT TAAAATCAAT CCCTTTCGAA GTGGCATAAG AGCACAAGCA GAAAAAATCT CGGAAAACAT GCGAAGTCCA ACATTTCGGC CATTTCTATA TTTAAATGGG AGCTGGGTGG ATGCTTAAAG CTTGGTGTGG CTGGATCGGC AGTTTTTAGA GTGGGAAAGC ATTTAGCCAT ATCATTCCTT CAGCAGGCTC CTCGCTTTGT CAGCTGGCAC CAGAAAATTC CATCGCCCTC AACAGTTGCC TGTTCAAATT TTTAATGACA CATCTCTTTC AGCCATGGCG GTTCGGTTTC CTGTAACACT GTGAGCGACG CTGGGACTCG TTTCTGACTG GTCCCACGGT TTATTTGGAA TGAAATCGAC TTTAAAGGTT TTGAGTCGGT ACGCACTAAA TCTCTTTTTC AAGGATGTCG TTCATGTCAA TTTTAAGACT GTCTATTGAC CAGCCGCGAT CGAATTGGTT TGGTCGCATA CAAGCGTTTC ACTGTCAGTA GACAAAGGAT TTGCCTAAAC CGTTGTGTTT CGTGTTTCGT AGGATACTCA CGGAGCAACA AGATCTAAAA TATTATCCTC ATAGCGCTCT AGCTGAAGCC GATGAGGTAA ATACGGCCGA GAATAGGTTT AATTTTAAAC TTGAACAAAT GTGTCTTGTT C
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Protein sequence | MSNMYGYNDY DGPHRAMARF SLEADDEDNP LQAGFWMEGD SLAPPCGTAV PTIHRMLDFA QVSSKDVVYD LGCGDARVCL EAFARKKCQS VGVEVEADLV SRGRELIARL NYVDQERLPF IIEQDLRIVL RNLVRLAAKA TAPTEQSDDI GALPLPTIII MYLLPEALAE LEDSLRELLR LLPESFRILC NTWGLNSLVP QQRMDVKEEG GAVTPLSIYT RKSL
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