Gene PHATRDRAFT_43579 details

Gene Information

• Locus tag: PHATRDRAFT_43579
• ID: 7197312
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 866571
• End bp: 868676
• Gene Length: 2106 bp
• Protein Length: 701 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002177704
• Protein GI: 219111905

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTCTA CATCACTTGA TCCAAAAAGC TCCAAAAAGC GCCCCCGTTC CATATCTCTG 
AGAAGCAATA ATGGCTGTAG CACCAAAGGA CGACTCGCAG ACAATCCAAC GCAGCAACGT 
AATCGGCAAC GGAAGAATCA GACCAAGCCG ACGGCATGGG TCGACCACTG GGAACTGAAC 
GCTGTGGGTA AATCACTGTG TGCAGCATCG GAGCTTTTCG TCGAGAATGC TGATAATTTG 
CTCACTACGA AGCAAGGGCA CGAATTGGGT CAAGCCGAAT CAATGGCGTT GTCAGAAGCC 
ATTGAGCGTG TCGCGGTATG GAGAACGCGA CAGACACAAC TGCCACACAT TGTCGAATCA 
TCGGCGGCCC TGGCTGAAAT ACTGTTGCGC GAGGCCACGA CAGCAACTGG TTGTAGCGCC 
ATGGAACTAC GACACGCCTA CGCATGTGCC GTGATCAGAT CGATCAACGG TCTGGCGGAC 
CCACTGCAAC AACAACGATC GGTAGCCACC AGCATTGCTT TACTCTGTCG CCAATTGGGT 
CTTCCATCCT GGCTAGTAGA TGTTCGTCAC GAGGCAACCC ACAATCAAAT GCCGACCTTG 
GCTGTACTCC GCATGGCGGC CAAAACGTTG CTGCAGTACT TTCAAGCTGT CTACTGGAAA 
CCAATCGCAA ATATTCCCGT GAACTACAAT GAGGAAGCAT ACACCTTGCT GGAAGAATAT 
GCAAGAAGAA CGCTGCCGCG GCAAGCAGAA TTCATTTCCG AAGAAGACAA TGCTACTTCA 
CAGCAAGACT CTGATAAGTC GGTAGACGAT AATGGCAGTC GCGAGGAAGA AGAAGCTATG 
GTGGGCGGTC GAAGGCTCGG AACAACGACA AATAGCTTTG CCCTACTTAT GGAACCGAAA 
AAGATCAAAC CCGTTAAGCT CGAAAAAAAG GAAAAAATAA AAAAGAAGAA AAGAAAGAAT 
GTTTCTGTCG ACGCCCTGAC GAAGTCAGCT TTGGCATTTG TTCAAGCTAA AATCCCAGTG 
TCGGAGGCTT TTCGGTCATT GCTTTCCTTT CTCGTATGGG GATTCGGCGG AACTTCAGGA 
GTCCTAGTTC CGCAGGCTTC CGGCGTCTTT TCGGTGAATA GCTTTGGAGT ACAGCAAATA 
CGAAAACATT ATATTCCCCT GATTTCGGCG GCTGTCAAGG AATGGCCTGG ATTTCATCGA 
GCACTTTTTA TCCATTTGTT TGAGTTTCTC TTTGTATCTG AGCAACGGGT TGTTATTCGA 
CCGGTAGAAC CATCATTGGC ACGCTCATTT TTCTTTGCTA AGTCGTGGAT TCAGCATTTG 
TTGACTCGCC AATTCTTTGA CTTTGTCGAT CCCGAACTCG TTCGTACAGA CACCGCATTC 
GAAGAGACTG ACTTGATGCC GCTTTCTATC CTTGAAGATG TTGGCTATCC GCTAAATTCT 
TTGTGCGATC GGCTCGAAAT AGCTAAACTA AAAGGATTCG CTCATTTCGA TTGCATTGCC 
TCGGTCGTTG AAACGTTCCG GCACATTCTC GGAGATACGC GAGTCGCTCG CCACGGCTAT 
CCAGAGAGTC AGGCTTTTAC CCTACCTGAA AAAGAGTTTA CTGCAATTGA CCCCTTACAG 
CTTCTAGAAA CTGAGACACT GGAAAACAAT GCGTCACTGG ATGAGATCGA AGCGATGTTG 
GCTGGGCAAG TATCGACGAC ATGCGAAGAC GATGACATGA GAAACAAGGC AATCAAATGC 
AACCCGCCGC TTACAAAGGA AGGAGGAGCT GATTGTAACA TTGCACACGG TGCTGTTGTG 
AATGAAAAAC AAATGAACTG CGAATTGGTG GACAATAATT TTTTCTGCGG TCAATCCGAC 
CCACAACCAC ACCGTAATCG TGAAGAAACA ACTGATTTGA GAGGGACGGC TGTTACATCG 
GAATTAAGTC AGCTACCCGA GGAAGTTTCA TCTCTTGACA TCAAGTGTGC CAACGAAAGC 
ACAACATTAC AGACAGGCTA TTCGTTCGGC AATCCGAATA GTGGGCGAAA AACGCGCCCG 
GTATGGAAAT ATTGCAAGTC ATGGGATGAA TGTTCCGTCG GTGCCCTACC GGGACGTCCC 
TCATAA 

 

Protein sequence

MISTSLDPKS SKKRPRSISL RSNNGCSTKG RLADNPTQQR NRQRKNQTKP TAWVDHWELN 
AVGKSLCAAS ELFVENADNL LTTKQGHELG QAESMALSEA IERVAVWRTR QTQLPHIVES 
SAALAEILLR EATTATGCSA MELRHAYACA VIRSINGLAD PLQQQRSVAT SIALLCRQLG 
LPSWLVDVRH EATHNQMPTL AVLRMAAKTL LQYFQAVYWK PIANIPVNYN EEAYTLLEEY 
ARRTLPRQAE FISEEDNATS QQDSDKSVDD NGSREEEEAM VGGRRLGTTT NSFALLMEPK 
KIKPVKLEKK EKIKKKKRKN VSVDALTKSA LAFVQAKIPV SEAFRSLLSF LVWGFGGTSG 
VLVPQASGVF SVNSFGVQQI RKHYIPLISA AVKEWPGFHR ALFIHLFEFL FVSEQRVVIR 
PVEPSLARSF FFAKSWIQHL LTRQFFDFVD PELVRTDTAF EETDLMPLSI LEDVGYPLNS 
LCDRLEIAKL KGFAHFDCIA SVVETFRHIL GDTRVARHGY PESQAFTLPE KEFTAIDPLQ 
LLETETLENN ASLDEIEAML AGQVSTTCED DDMRNKAIKC NPPLTKEGGA DCNIAHGAVV 
NEKQMNCELV DNNFFCGQSD PQPHRNREET TDLRGTAVTS ELSQLPEEVS SLDIKCANES 
TTLQTGYSFG NPNSGRKTRP VWKYCKSWDE CSVGALPGRP S