Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43450 |
Symbol | |
ID | 7197162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 482823 |
End bp | 485516 |
Gene Length | 2694 bp |
Protein Length | 467 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177944 |
Protein GI | 219112385 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAGC GACTCTGTGT CTTACAGTGC TGTGCCGTGG TCCTGATGAT CCTGCTACTC AACGTTCATT GCGCAGTCGA GATGAACGTC CTCTTCGTCG GAAATTCTTA TGTGAACAAC AATAACCTTC CCGAAATTTT AAATCAAGTG CTGGTGGATG CTCTACCAAA ATCGAACGAG ATATCGGTGC GTTCTTATGC ACCCAACGGA CAAACTTTTT TGGAACACGT ACAGGACGTC GACGGTACCA GAGGCAACAC AGAGCTCAGT CAATGGCTCC GAACCGACCC CGAACCTTGG GATTGGGTCA TTCTCCAAGA ACAGAGTCAG ACTCCAGGGT TTCAGGGATT CAGCAGCGAA TTTACGGACA GCACGGATAG CGCCATTCGG CTGGACAACT ACATTGAAGC AACAGGGGGC GAAACGGTGT TCTTGATGAC GTGGGGTCGA CGAGAAGGCG ATGAAAGGCT ACCGTCTTTC TACCCTGACT TTACCACGAT GCAAAATTTG CTTACTGCAG GTTATGACAC TTACATGGAC ATTACCAGCA CAGCAAAACG GCCCACAAGG GTTGCTCCTG TCGGAATCGC CTTCCAAATT GTTCATGATA GAATTTTAAG GGATGGAGGT GACCCTTTGG CATCTGGGAG TGATTTTTCC AGGCTATACC GCAACGATGG CAGCCATCCA AGTGTAGAGG GTAGTTACTT GGCCGCTTGT GTCCTGTATG CAACATTGAC CAATCGTGAC CCTCGACAGT TAAAGTATGC ACCTGATGCA GTAAGTCAAC AAAGGCGAAT GGAGATCCAA GAAGTAGCAT TTGACGCAAT ACGAATACGT GGGGATACTA TAGTGTCCAA CGCGGCACCA CCCGAGGCCA ATCCTACATC AAGTCCCACA AGCGATCCTA CGCGAAAACC GACTCCGAGT CCAACCCAAG TATTCGTTCC TCCTCCAACA CCGCGGCCAA CTTTTGCGAT TTCGGCACAA CCGATCAGCG TACCGTCTTC TTCCCCAACA ACAGCCGAGC CGTCGGAATT TCCTACTGGA GAACCCACTG TTAGCCTGCC ATCGAGCGAC TCGCCCACGG TGTTCCCCTC GGACATTCCA TCTCTCGTTC CTTCTATTGA CCCCTCACCT ACTCCTACCG TGACGCCTTC GACCGCTCCA TCCATTTCCA GGGCGCCCAG TCAAAGCCCA ACACTCAATC CAAGCGCCAT GCCTTCCGTG TCCTTCAGTC CATCTGTTTC CAATTTTCCT TCTTCCGCGT CCCCTTCGAC TGACGAGGGT TCCTTCGGGA ATAGTTCCGC CGGCACCCGC GGACTGAAAG CATCATCCAC GCAGTTAACG TTGGTGTATG GGCTACTGCC TCATTTAATG GTTTTCTTTT TTCTTTACTT TTAAATCGGG TCGTCACGGG GCATTCCGCC GGGTAGTTTG CGCGACGTGC AATGCAATAA GACTTTTAGA AAACGATTTA GTTCTCGGTA ATAATACGAT ACAGGCGTTC ATCTAGGTTC GATGTGGAGA CCACGCATTC CTCACAGCCA CTTGGTAGCA CTGGAATGCG TGTGTATGTA CTCTATTGGG ATACGGTCCG GTCCGGTCCG CGGTCAACTG TACTGGGAGC TTGCCGCGGC ACGCATCATG TTTGTCCCTA TCAAGCATGA GTCAACTTTA TGAGTTGTAC CGTGCTTGCC AAAGACGAAG GCGGTCCCGG GTGGCCTCCA TCGTGGGCAG TTCGACGAGC GTGTTATTGG CCGATCCGCC CCTCCGGGAC GGAAAGTAGG CACGGAGGAT TTCGTCCCAC TCGTCGTTGG TCGGATCCGC TTCTCCTACC GCGGACGGAG CGTTCTTTGC CGCAACTTGC TCGGCGAGCG TGGTCAGGAG ATTTCCGACA AGAGCTTCGT GCACAGCGGG TTCGCCGTGG AACGGCACGG GGTGGAGCAA GTAGGATTGG AGTTCCGCCA GGGTACGGTC GTATCCCAAT TCGGACGGAC GAGGTCGCAC GCGATCCGGG CGGTGTGGAG TGGGGGCGAC GCCCGCGTTG ACGTCAGTAC CACTGTTGGT CAAACTTTTG CCGTGGGGAT CGGAAGGACT GTCCGTTGTG GAAGTGGTGG TGGGGGACGT CTGGATGGAC GCTGCCGCCC GGAGAATGAT GGTACGCAAG CGTGTGAGAA TGTGCACGTC CGAATCGTCC TTACACAACG ATTTGTCCGT CACGGACGGT TCCAGGTAGA GTCGCAAGAG GAGTTCCGGC GACGGATACC AGCACAAACA AGCGGGTGTG TGAGAAGAGC CGTCGTTAGC GACAACAGCG GCATCGACGC AGACAGTTTC GTCCGGGGAT CCCTCGAATA CGGACGGCCC GACGCGGTAC ACCCAGTCGT CAATTTGGAG CCACAGCGAG AGATCCGACG TGGCGAAGCG TACGTTCACG GCAGCGGGAT CCGCGGCGTG ACCAAAAAAG GCTGGTCCCA GAGAAGGACG ACCGGGAGAA TGCGCGAGGG GTTCCACCGA CATGACCAAC GATCGCGACG TCGTGCGGTC CCCCAGCGTA AACACGGTGG TGTCGGCGGG GAATGTGGTC GTCCATGTGG GTCGTAACGT GTGCGGCAAA GCTGCCAACC AGAAACTGGA GCGGTCCATA GACAGCGGTG ATCCGTTACA CCGGTTATCA GGAATAGAGG AAGG
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Protein sequence | MKQRLCVLQC CAVVLMILLL NVHCAVEMNV LFVGNSYVNN NNLPEILNQV LVDALPKSNE ISVRSYAPNG QTFLEHVQDV DGTRGNTELS QWLRTDPEPW DWVILQEQSQ TPGFQGFSSE FTDSTDSAIR LDNYIEATGG ETVFLMTWGR REGDERLPSF YPDFTTMQNL LTAGYDTYMD ITSTAKRPTR VAPVGIAFQI VHDRILRDGG DPLASGSDFS RLYRNDGSHP SVEGSYLAAC VLYATLTNRD PRQLKYAPDA VSQQRRMEIQ EVAFDAIRIR GDTIVSNAAP PEANPTSSPT SDPTRKPTPS PTQVFVPPPT PRPTFAISAQ PISVPSSSPT TAEPSEFPTG EPTVSLPSSD SPTVFPSDIP SLVPSIDPSP TPTVTPSTAP SISRAPSQSP TLNPSAMPSV SFSPSVSNFP SSASPSTDEG SFGNSSAGTR GLKASSTQLT LVYGLLPHLM VFFFLYF
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