Gene PHATRDRAFT_43447 details

Gene Information

• Locus tag: PHATRDRAFT_43447
• ID: 7197161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 476673
• End bp: 478688
• Gene Length: 2016 bp
• Protein Length: 671 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002177627
• Protein GI: 219111751

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGCCG CTGCCAAGAA TACGTCCTCA AGGAGTCACC ATCCCAAAAA GCAACGCGTC 
TCGGCCAAGC ACACGGCACA TGATCAACCC CCACGAATGG CACCCACCGA AAAATTGGAA 
CAAGGACGTC ATCAACACCA ACACCACCCT ATCGTCGAAC ACGACGATGA CCTATCCCAC 
GCAACGTCTG ATCGAAACAC TGGGACGTCC TTGTCCGAGA CTACCAAAGC GACCCGTACA 
GTGTCGGAAA CGTGTGATTA TATTGCCGAG TTGAGTGAAG CCATACTGGA ACAACCGGAC 
AAGGCCTTTA TCAGCAGCGA AATTCCCAAT CCGGCCAATC CGCGGTATCC CAAACAGGGG 
CCGTCCAAAA TGAAGCAGTT GCTCGTTCTC GCCAACGCAT CCGTAGTGCC TCGGCACAAC 
AACCACAACA CCGATAACGA CGATCCGTCG TCCCACAGCG CGTATACCTC ACAGCTAGCG 
ACAATGTCGT TGCTCGCCAT TTTTCGAGAC ATTCTGCCCT CCTACCGGAT CAAGCTCCCG 
ACCACGCAAC AAGCGGCCGT CAAAGTTTCG AAAGAAACCA AAGTACTTTG GGATTACGAA 
CGTGCACTCC TGCAATCCTA CCAGGAATAC CTACAAATCC TCGAACACTG TTGGGATGCC 
ACCCGCACTG CTCCGCATCC GTCCCAACTA GGGGTCACGA GTATCCTCAG TCTCTGCGAA 
CTCCTCAAAT CGGCGTTTCA TTTCAATTTC CGCTCCAACC TACTCACGGT CGTGAGTCGC 
CATACGAATC ATCCCAGTAC CGTGGTCGGC GATGCGTGCT GCGCGGCCAT AGCCTACGTC 
TTTGCGCACG ATGCACAGGG CGAAGTTGCG CTCGAAGCTA CCCGGCTGCT GGCCAAGTTC 
GTCAAAGATC GGGCCTTTAA AATTCGACCC TCCGTTCTCC GGACCTTTAC CAGTCTACCC 
CTCCGCGTGC ACGTGGACGA AGCCCAAGCG GCGAAACTGG CGGCCGCCGC CAACGCCAAG 
AAACGCAAAA AAGACAAGGA ACTCGCCGAA ATTGACGCCG AACTCAAAGA AAGTGACGCC 
AAGGTGGACA AGATTATACT CGCACGGTGC CAATCGGAAA CGCTTCAACA CGTTACGCTT 
ACGTACTTTC GGATTCTGAA GCACGATAAT TTGCAAGCGG CACACGTCGA GACTCTGTTG 
CCGGCCGCGC TGGAGGGTTT GGCCAAGTTT GCTCATCTCA TCAATATTGA TACCGTCATG 
GATTTACTCG GCGTTTTGAA GGATTTGCTG AAAAAGATGA ACGCACTACC TCTGGAGGCC 
GCGCTCAATT GCATTTTGAC AGCGTTTCAA ACCTTGCAGG GGCCGGGGAA GGAAATGAAC 
ATTGACGTCA AGGAATACAT TGTTCCGCTC TATACTCAAT TACCGCGTCT GGTGGGGGAC 
GTTAATTGTC GTCGGCACTT GCCCACGGTA CTGCTCTGCT TGAATGCCGC CTTTATCAAA 
CGCCGTGAAT ACTCAACGAT TCGAGTTTCT GCCTTTTGGA AACAAATCCT GACCGTTTCC 
TTGCACGTAC CTCCGCACAC GGCGGTTCCG TTGATAGCCT TTGGACGGCA ACTTCTCCAA 
CGATATCCCG TCACACACCA GATGCTGGAA AATGAACAAG ACGTGATTAC GTCGGGAGAG 
TATACACCCG ACGTGGAGGA TCCCGAGCAC AGCAATCCTT TGGCCACGTC GGCCTGGGAA 
TTAGCCTTGG CCAAATTCCA CGTGCACCTT TCGGTTGTTC AGCAAGCACA GAGTACCGCA 
ACGTTAAGGC TACCCAATCT CCCGACCGAG AGTCCCGAAC GCTTGTACCA GGAACTGTTT 
CGTGCGGAGG ACGAGCTCTT TTTCTCCTTC CAGCGTGTGC GTAAAAAGCA TCCGTTGACA 
CCGCCGAAGC AGGATGGTAG CAAGAAACGG AAGCAGTACC GTTTCCTCAC GCCGCGGGCG 
ACGGAATCAT TCTTGTTGAA AGCGAACGCA TTGTAG 

 

Protein sequence

MGAAAKNTSS RSHHPKKQRV SAKHTAHDQP PRMAPTEKLE QGRHQHQHHP IVEHDDDLSH 
ATSDRNTGTS LSETTKATRT VSETCDYIAE LSEAILEQPD KAFISSEIPN PANPRYPKQG 
PSKMKQLLVL ANASVVPRHN NHNTDNDDPS SHSAYTSQLA TMSLLAIFRD ILPSYRIKLP 
TTQQAAVKVS KETKVLWDYE RALLQSYQEY LQILEHCWDA TRTAPHPSQL GVTSILSLCE 
LLKSAFHFNF RSNLLTVVSR HTNHPSTVVG DACCAAIAYV FAHDAQGEVA LEATRLLAKF 
VKDRAFKIRP SVLRTFTSLP LRVHVDEAQA AKLAAAANAK KRKKDKELAE IDAELKESDA 
KVDKIILARC QSETLQHVTL TYFRILKHDN LQAAHVETLL PAALEGLAKF AHLINIDTVM 
DLLGVLKDLL KKMNALPLEA ALNCILTAFQ TLQGPGKEMN IDVKEYIVPL YTQLPRLVGD 
VNCRRHLPTV LLCLNAAFIK RREYSTIRVS AFWKQILTVS LHVPPHTAVP LIAFGRQLLQ 
RYPVTHQMLE NEQDVITSGE YTPDVEDPEH SNPLATSAWE LALAKFHVHL SVVQQAQSTA 
TLRLPNLPTE SPERLYQELF RAEDELFFSF QRVRKKHPLT PPKQDGSKKR KQYRFLTPRA 
TESFLLKANA L