| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43443 |
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| Symbol | |
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| ID | 7197159 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 467144 |
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| End bp | 468898 |
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| Gene Length | 1755 bp |
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| Protein Length | 170 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177941 |
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| Protein GI | 219112379 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00167812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACAGTAAAT TAGAAATTTG TCAGTTTTAA CTGTAAATTG CCTATCGGAT AGATGGATCA
CTCGTCTTTT CATTGATGTA AACGTGGCTT CCAATTAGAA CAGCCAGAAC AAAACTTGAC
CTCCGGGTTC TCTCGAAAGA CACTTCGCGG TTGGTTGCAG TTCCGATCTT GCCGCGATCT
TTTTGCCGTG GTTTACGTCA ACAACATGAG ACCTTGAAGG AAAATCTGCA TTGATTCCTG
AAAGCCCCGC ATTGCGACTT TGATTCAATA GATGAGAAAG AGCCGGTGGT GGGCTTTCTA
TTTAGCATTC AAATAAACTT TCATTGAGAG ACATCGGTGC TTCATTTGTG GATTATTTAT
GCTAAAAGTT GCCTGCGGCC CGAGCCGAAT TGATCGAAAA CTCATTTTGC AAAAGCATGT
GTAGAAATCC AGCCGGATTG ATTCTTGGAC ATTGTTGACA TCGAAGAGTG ATTAAAAGCT
GGCAAACCTC GATAAATAGA CGTACAGAGG GGTATCGGAA CTGGTAAAAG AGATCCAATG
TCCACAGAAC AAGGCGAAAG GTCTTCCAGT CAAAAAGCGG CCTCATCAAA AAGCCAAAAT
CCCTCCGAAA CCTTGGTTGC TATTAAACCT GAAAAAACAA GCTCCCAATC AGTCTCGTCG
GATCCCGTCA CCACTCCTTC GAAGCTGAAA GATGAAGTAT TTCTAAAACC ACATCCTGTC
AAACGTGACC AGCCGTCGGA CAGTACCACA CCATCCACTC CAGAGGACCG CCCAAATCGT
CCGCTCCAAG TTATCGCAGT CAGTGCTTCC AAGGGCCCCG CAGCCTTTTT CAATCTCGCC
CGAAAGTTTC TCGTCACTGA CGAGATGTGC GATCTGTCAG CGTTGGAAGG AGCTATTGTG
ACAGCAGTTG ACGCGGCACA TCTTTTGGAA CGGTCGAAAC TTGCCGCGAT CGTCAGGTGA
GAAAAACATA CTGCTGCTTT TTACTGCATC CGTACGATGC AATTTTTAGA TTCTGTCTTT
GTGCGTCTGT CATCTCACAT TTTCTTGATT TTACCCAGAG TACAAACGTC TTACGTAGCA
GTGGAACCGA GGAGGAAAAC AGTACCATCG CCACAGCTGC AACCAAACTC GCCCCCCGGC
GAGGCTTCAT TGTCACCCCT ATCACCTTCT AATCCTAACG TAGCATCGTC AAGACATACA
GCGCAGTCAC CACCTATAAC GCATCCAGTT TCCACGGAAG ACTCACAGTC AGCAACAACT
CGAGGGAGAA ACACACCCGG AGGTCGGGAG CTTCGGAGAG CACGAATTGT CATAACTGTG
AAACGAACAG AAAGGTACAA GCAATGGCTG GAGGAGAATC CGCTCCAAGC AATAATTGCT
GGTGACGATG GAGACGACGA CCAGAGAGAT TCTCCAATTC CTACGGATTC GAGAGAATCT
GGATTTTCCT CTTCTCACCA ACAACAGAAG CAGCGATGAA ACGCACCGTG CCATGTGTAC
CTGGCGATCT TCAAAATATT CACGCATTCC TACGACGCTC GTCGGAGACA GGTACCTTGA
CATTTCCATG TATCCTCAAC CTTGCAGCGT TCGCCTCTTT GTTGGACAAA CATCCGAAAT
TTTCCACGCT AGGATCGGCC AACCAACCAA AATTACTATT AACCAATAGA CGTCTAAAAC
TGTATATCTT TGCGCAGTCT CGTGGGTTAG TACAGATGCT TGCAGCAAGT GTCAACCTTC
ATTGGAAGAT GTCCA
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| Protein sequence | MSTEQGERSS SQKAASSKSQ NPSETLVAIK PEKTSSQSVS SDPVTTPSKL KDEVFLKPHP
VKRDQPSDST TPSTPEDRPN RPLQVIAVSA SKGPAAFFNL ARKFLVTDEM CDLSALEGAI
VTAVDAAHLL ERSKLAAIVS SGTEEENSTI ATAATKLAPR RGFIVTPITF
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