| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43434 |
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| Symbol | |
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| ID | 7197440 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 449785 |
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| End bp | 451691 |
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| Gene Length | 1907 bp |
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| Protein Length | 593 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177935 |
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| Protein GI | 219112367 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.996285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTGT TGTCGACGCG ACGCTCAACC CACGCCTTGG ATCCACGATC GCTCGCAAGC
TTCCAGCAGC GGCTGGAGTG GCTACGAGCG GCTCTCCAGC GTGTGCATGC GAATGTTAGT
CGCGACGATC TTCGAGATGA GCAAGAACAG CTCTCGTACG ATATTTATGT GACGCAACTG
TCGGATTATA TACGCTTCAC GCCATGGCAC AAATCCTATC TCTGCTGCTT GAATCGTTTG
GAAGGTCCCC AAACAGACTT GCCACTATAT GCGCGATACT TGCCTACAAA AACCAAAGAG
GAAAGGGCCT TCTATTTGAA GTTTCTGCAA GCAATTCCAA TTCAATTGGG TGAGGTTATA
AATCTCCTGC AGACAGGCCT TGTGGAGAAT CGGACTCCGC CGAAGGTAAG CTTGGATGGC
GTGGTACCAC AGGTTCGTGG TATGATCAAT GGCAATCTTG AGGCATTCCG CGAGCCTATC
CGCAACGCTT TCCCTAAAGA CGAGGCCAAG ATCTTGGAAG CATGTCAAGC CCAAATCGAC
GGATCTGTGA CACAGGCTTT TGCAGATTTC GCTGATTTCT TGCAGAATGA GTACATTCCT
CATTTAAGAG AAGACATCAG TGCGGTGACT GGATATCCAG ATGGAAAGCA ATACTATCAG
GACTGCCTAG CGTTTCACAC AACCACCAGT ATGACCCCGG ATGAAATTCA TGAGCTTGGA
TTGAGCGAGG TTGAGCGCGT ACGTCAAGAA ATGGAAGCGA TTGCCGCCCA AGCTGGGTAC
GGAGGTCGAC TCGATGACTA TCTGGAACAT TTGCGAACTT CCAAAGTTTA TGAGGCAGAG
TCTGGACAAG CTTTGTGTTC CTTATTTCGA GATATCACTG GGAGGATTGC CCCCGCAATG
CTCAAATTGT TCCATCTCGA AACGCTGCCA CGTATGCCGT TTTCGATCGT CGAAACTCCC
TCTGCTCATG CTTCCATGGC ACCAGCTGCG TATTACTTAG CCGGTAGCAC CAATCAAAGT
GCGTCGCGTC CGGGTATATT CTATGTAAAT ACATCAGAGC TTCCGACTCG TCGCACTTAC
GAGTGTGAAG CTTTGGCCTT ACACGAAGCA ATCCCAGGAC ACCATACACA AGGATCGATT
CAAGGTGAAA GTCACAACTT GCCCGCATTT CGTCAAATGC AAGAAGATCG GCGGTATTTT
GAAGCTCCCT GTGAGTGAGC AAATGCTGAT ACTGCGTCCT TTTCATTCTT CCAATGCATA
AAACTAGTCT CATATCTCTC TTCTTTTGCT ATAGGCCGTT TCCCCTTCTA CACTGGCTAT
ATAGAAGGCT GGGGTCTGCA CAGTGAGACG CTCGGTGAAG AGCTCGGTCT GTACACAAAA
CCAGAGAGCA AAATGGGACA GCTTTCCATG GAGGCCCTCC GTAGTTGTCG ACTGGTGGTG
GACACAGGGA TGCACGCCAT GGGTTGGACG CTGGACGAGG CATTGCATTT TATGCTGGAA
AATACCGCTA TGGGAAAGCA TGATGCCGCC ACGGAAGTAG CACGGTACGT CACTTGGCCC
GGACAAGCCA CTGCCTACAA AGTAGGGGAG CGCTATTTGC GGAAACTGCG CACTATGGCA
GAAACAGAAT TGGCTGAGAA ATTTGATCCG AGAGATTTTT ATGATGTCGT ATTGCAAGTG
GGACCAGTCC CGCTGGACAC TCTGGAAAAG CTTGTTAGGG ATTACATTCA GGAAACAAGC
AATAGAACCG CTTCATCAGG TGGGGACTTG AGCGAGGGTG AACCTGGCTT TCTGGAACAA
ATGACCTTTT TCAATTGGTG CAAATGTTGT GTTGTCCCGG GGTCGTGTCA GTCAACAGCA
CGTTAGAATA GAATGCTTTT ATAAGATTTA ACACTATCTA ATATAGT
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| Protein sequence | MGLLSTRRST HALDPRSLAS FQQRLEWLRA ALQRVHANVS RDDLRDEQEQ LSYDIYVTQL
SDYIRFTPWH KSYLCCLNRL EGPQTDLPLY ARYLPTKTKE ERAFYLKFLQ AIPIQLGEVI
NLLQTGLVEN RTPPKVSLDG VVPQVRGMIN GNLEAFREPI RNAFPKDEAK ILEACQAQID
GSVTQAFADF ADFLQNEYIP HLREDISAVT GYPDGKQYYQ DCLAFHTTTS MTPDEIHELG
LSEVERVRQE MEAIAAQAGY GGRLDDYLEH LRTSKVYEAE SGQALCSLFR DITGRIAPAM
LKLFHLETLP RMPFSIVETP SAHASMAPAA YYLAGSTNQS ASRPGIFYVN TSELPTRRTY
ECEALALHEA IPGHHTQGSI QGESHNLPAF RQMQEDRRYF EAPCRFPFYT GYIEGWGLHS
ETLGEELGLY TKPESKMGQL SMEALRSCRL VVDTGMHAMG WTLDEALHFM LENTAMGKHD
AATEVARYVT WPGQATAYKV GERYLRKLRT MAETELAEKF DPRDFYDVVL QVGPVPLDTL
EKLVRDYIQE TSNRTASSGG DLSEGEPGFL EQMTFFNWCK CCVVPGSCQS TAR
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